Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0132c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
158,761	+		Rv0131c	0.33	+0.3
158,840	+		Rv0131c	0.39	-0.1
159,045	+		Rv0131c	0.54	-0.4
159,046	-		Rv0131c	0.54	+0.6
159,592	-				+0.0
160,264	+		Rv0132c	0.52	-1.5
160,264	+		Rv0132c	0.52	+0.6
160,265	-		Rv0132c	0.52	+0.6
160,265	-		Rv0132c	0.52	-0.2
160,265	-		Rv0132c	0.52	-0.2
160,302	-		Rv0132c	0.56	-0.5
160,302	-		Rv0132c	0.56	-1.2
160,427	+		Rv0132c	0.67	+0.8
160,433	+		Rv0132c	0.68	+0.7
160,433	+		Rv0132c	0.68	-0.8
160,433	+		Rv0132c	0.68	-0.5
160,434	-		Rv0132c	0.68	+1.7
160,434	-		Rv0132c	0.68	+0.1
160,434	-		Rv0132c	0.68	+0.2
160,434	-		Rv0132c	0.68	-1.2
160,436	-		Rv0132c	0.68	-0.4
160,546	+		Rv0132c	0.78	+1.2
160,546	+		Rv0132c	0.78	+0.1
160,547	-		Rv0132c	0.78	+1.7
160,547	-		Rv0132c	0.78	+0.0
160,568	+		Rv0132c	0.80	-0.2
160,569	-		Rv0132c	0.80	+0.2
160,941	+		Rv0133	0.12	+0.2
160,941	+		Rv0133	0.12	+0.7
160,966	+		Rv0133	0.16	+0.7
160,967	-		Rv0133	0.16	-0.8
161,245	-		Rv0133	0.62	+0.1
161,245	-		Rv0133	0.62	-0.3
161,245	-		Rv0133	0.62	-1.4
161,349	+		Rv0133	0.79	+0.4
161,385	+		Rv0133	0.85	-0.5
161,386	-		Rv0133	0.85	+0.4
161,386	-		Rv0133	0.85	+1.1
161,386	-		Rv0133	0.85	-0.3
161,446	+				+1.2
161,607	+				-1.9
161,608	-				+0.2
161,702	-				-0.4
161,702	-				-0.2
161,702	-				-0.2
161,702	-				-0.3
161,756	+				+0.2
161,756	+				-1.1
161,756	+				-0.2