Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0629c and Rv0630c overlap by 4 nucleotides Rv0630c and Rv0631c overlap by 1 nucleotides
Rv0629c: Rv0629c - Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide), at 720,005 to 721,732
Rv0629c
Rv0630c: Rv0630c - Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease), at 721,729 to 725,013
Rv0630c
Rv0631c: Rv0631c - Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide), at 725,013 to 728,306
Rv0631c
Position (kb) 721
722
723
724
725
726 Strain fitness (log2 ratio) -1
0
1
2 at 721.713 kb on + strand at 721.868 kb on + strand at 722.045 kb on + strand at 722.160 kb on - strand, within Rv0630c at 722.856 kb on + strand, within Rv0630c at 722.987 kb on + strand, within Rv0630c at 722.988 kb on - strand, within Rv0630c at 722.988 kb on - strand, within Rv0630c at 723.077 kb on + strand, within Rv0630c at 723.078 kb on - strand, within Rv0630c at 723.105 kb on - strand, within Rv0630c at 724.097 kb on + strand, within Rv0630c at 724.098 kb on - strand, within Rv0630c at 724.490 kb on + strand, within Rv0630c at 724.535 kb on + strand, within Rv0630c at 724.536 kb on - strand, within Rv0630c at 725.315 kb on - strand at 725.503 kb on + strand, within Rv0631c at 725.852 kb on - strand, within Rv0631c
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 721,713 + -1.1 721,868 + +0.4 722,045 + +0.1 722,160 - Rv0630c 0.13 +1.1 722,856 + Rv0630c 0.34 +0.4 722,987 + Rv0630c 0.38 +0.7 722,988 - Rv0630c 0.38 +0.8 722,988 - Rv0630c 0.38 -0.1 723,077 + Rv0630c 0.41 +0.6 723,078 - Rv0630c 0.41 +1.0 723,105 - Rv0630c 0.42 -1.2 724,097 + Rv0630c 0.72 -0.6 724,098 - Rv0630c 0.72 -1.1 724,490 + Rv0630c 0.84 +1.9 724,535 + Rv0630c 0.85 -0.5 724,536 - Rv0630c 0.85 +1.4 725,315 - -0.5 725,503 + Rv0631c 0.15 +0.7 725,852 - Rv0631c 0.25 -0.8
Or see this region's nucleotide sequence