Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3468c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
3,885,010	-				-0.4
3,885,535	+		Rv3468c	0.51	+0.6
3,885,535	+		Rv3468c	0.51	-0.7
3,885,536	-		Rv3468c	0.51	+0.2
3,885,552	+		Rv3468c	0.53	+1.9
3,885,552	+		Rv3468c	0.53	+0.0
3,885,553	-		Rv3468c	0.53	+1.2
3,885,553	-		Rv3468c	0.53	-0.3
3,886,292	-		Rv3469c	0.22	-1.1
3,886,539	+		Rv3469c	0.46	-0.9
3,886,576	+		Rv3469c	0.50	+0.3
3,886,577	-		Rv3469c	0.50	+0.9
3,886,751	+		Rv3469c	0.67	-0.2
3,886,751	+		Rv3469c	0.67	+1.9
3,886,752	-		Rv3469c	0.67	+1.9
3,886,752	-		Rv3469c	0.67	+2.9
3,886,870	-		Rv3469c	0.79	+1.4
3,886,870	-		Rv3469c	0.79	-0.1
3,887,019	+				-0.1
3,887,019	+				-0.9