Experiment: R2A with 1-octen-3-ol 1.3568235 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS00430 and ABIE51_RS00435 are separated by 94 nucleotides ABIE51_RS00435 and ABIE51_RS00440 are separated by 413 nucleotides
ABIE51_RS00430: ABIE51_RS00430 - glycerol-3-phosphate 1-O-acyltransferase PlsB, at 91,494 to 94,295
_RS00430
ABIE51_RS00435: ABIE51_RS00435 - hypothetical protein, at 94,390 to 94,590
_RS00435
ABIE51_RS00440: ABIE51_RS00440 - hypothetical protein, at 95,004 to 95,900
_RS00440
Position (kb) 94
95 Strain fitness (log2 ratio) -2
-1
0
1 at 94.293 kb on + strand at 94.294 kb on - strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.313 kb on + strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.314 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.349 kb on - strand at 94.357 kb on - strand at 94.357 kb on - strand at 94.357 kb on - strand at 94.357 kb on - strand at 94.357 kb on - strand at 94.738 kb on - strand at 94.738 kb on - strand at 94.914 kb on + strand at 94.914 kb on + strand at 94.914 kb on + strand at 94.915 kb on - strand at 94.915 kb on - strand at 94.915 kb on - strand at 94.915 kb on - strand at 94.915 kb on - strand at 94.915 kb on - strand at 95.170 kb on + strand, within ABIE51_RS00440 at 95.170 kb on + strand, within ABIE51_RS00440 at 95.171 kb on - strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.227 kb on + strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.228 kb on - strand, within ABIE51_RS00440 at 95.332 kb on + strand, within ABIE51_RS00440 at 95.332 kb on + strand, within ABIE51_RS00440 at 95.332 kb on + strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.333 kb on - strand, within ABIE51_RS00440 at 95.374 kb on + strand, within ABIE51_RS00440
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 1.3568235 mM remove 94,293 + +0.6 94,294 - +0.4 94,313 + +0.3 94,313 + -0.3 94,313 + +1.0 94,313 + -0.4 94,313 + +0.5 94,313 + +0.1 94,313 + -0.8 94,313 + +0.1 94,313 + -0.3 94,313 + +1.6 94,314 - +1.0 94,314 - -0.5 94,314 - +0.3 94,314 - -0.1 94,314 - -1.0 94,314 - +1.5 94,314 - -0.4 94,314 - -0.3 94,314 - -0.3 94,314 - -0.1 94,314 - -0.4 94,314 - -0.4 94,314 - +0.1 94,314 - -0.1 94,349 - -0.1 94,349 - +0.1 94,349 - +0.1 94,349 - +0.2 94,349 - -0.5 94,349 - +0.7 94,349 - +0.6 94,349 - -0.4 94,349 - +0.6 94,357 - +0.2 94,357 - -0.1 94,357 - +0.2 94,357 - +0.1 94,357 - +0.6 94,738 - -0.0 94,738 - +0.7 94,914 + -0.2 94,914 + +0.5 94,914 + -0.1 94,915 - -0.1 94,915 - +0.1 94,915 - -0.1 94,915 - +0.2 94,915 - -0.8 94,915 - -0.0 95,170 + ABIE51_RS00440 0.19 -1.3 95,170 + ABIE51_RS00440 0.19 -0.4 95,171 - ABIE51_RS00440 0.19 -0.6 95,227 + ABIE51_RS00440 0.25 +0.3 95,227 + ABIE51_RS00440 0.25 -1.2 95,227 + ABIE51_RS00440 0.25 -1.5 95,227 + ABIE51_RS00440 0.25 -1.2 95,227 + ABIE51_RS00440 0.25 -1.9 95,227 + ABIE51_RS00440 0.25 +0.7 95,227 + ABIE51_RS00440 0.25 -1.0 95,228 - ABIE51_RS00440 0.25 -1.1 95,228 - ABIE51_RS00440 0.25 +1.0 95,228 - ABIE51_RS00440 0.25 -1.1 95,228 - ABIE51_RS00440 0.25 -0.3 95,228 - ABIE51_RS00440 0.25 -1.1 95,228 - ABIE51_RS00440 0.25 -0.8 95,228 - ABIE51_RS00440 0.25 -1.3 95,228 - ABIE51_RS00440 0.25 +1.3 95,228 - ABIE51_RS00440 0.25 -0.5 95,228 - ABIE51_RS00440 0.25 -2.1 95,228 - ABIE51_RS00440 0.25 +0.0 95,332 + ABIE51_RS00440 0.37 -0.5 95,332 + ABIE51_RS00440 0.37 -1.0 95,332 + ABIE51_RS00440 0.37 -1.4 95,333 - ABIE51_RS00440 0.37 -0.5 95,333 - ABIE51_RS00440 0.37 -1.0 95,333 - ABIE51_RS00440 0.37 -0.0 95,333 - ABIE51_RS00440 0.37 -1.5 95,333 - ABIE51_RS00440 0.37 -1.3 95,333 - ABIE51_RS00440 0.37 -0.5 95,333 - ABIE51_RS00440 0.37 -0.2 95,374 + ABIE51_RS00440 0.41 -1.2
Or see this region's nucleotide sequence