Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3614c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
4,053,828	+				-0.2
4,053,883	-				-0.2
4,054,058	+				+1.8
4,054,058	+				-0.3
4,054,059	-				-0.0
4,054,061	+				-2.0
4,054,061	+				-1.4
4,054,062	-				-0.1
4,054,062	-				-0.5
4,054,241	+		Rv3614c	0.18	-0.2
4,054,267	+		Rv3614c	0.23	-2.6
4,054,267	+		Rv3614c	0.23	-0.7
4,054,268	-		Rv3614c	0.23	+0.3
4,054,271	+		Rv3614c	0.23	-1.6
4,054,272	-		Rv3614c	0.23	-0.6
4,054,272	-		Rv3614c	0.23	-2.2
4,054,335	+		Rv3614c	0.35	-0.9
4,054,600	+		Rv3614c	0.83	+1.8
4,054,818	-				-0.7
4,054,818	-				-0.8
4,054,862	+		Rv3615c	0.16	+0.2
4,054,863	-		Rv3615c	0.16	-0.0
4,054,865	-		Rv3615c	0.17	-0.2
4,054,866	+		Rv3615c	0.17	-2.7
4,054,866	+		Rv3615c	0.17	-1.0
4,054,867	-		Rv3615c	0.18	-1.4
4,054,867	-		Rv3615c	0.18	-1.1
4,054,951	+		Rv3615c	0.45	+0.2
4,054,951	+		Rv3615c	0.45	-0.9
4,054,951	+		Rv3615c	0.45	-0.2
4,054,959	+		Rv3615c	0.47	-0.9
4,054,960	-		Rv3615c	0.47	+0.0
4,054,960	-		Rv3615c	0.47	+0.4
4,054,960	-		Rv3615c	0.47	+0.0
4,055,082	+		Rv3615c	0.87	-0.3
4,055,083	-		Rv3615c	0.87	-0.7
4,055,083	-		Rv3615c	0.87	-0.2
4,055,143	+				-2.4
4,055,144	-				-0.4
4,055,297	+				+0.1
4,055,371	-		Rv3616c	0.15	+1.0