Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2733c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
3,044,621	+		Rv2732c	0.40	-0.3
3,045,544	-		Rv2733c	0.36	+0.4
3,045,949	-		Rv2733c	0.63	-2.1
3,046,022	+		Rv2733c	0.67	-0.5
3,046,022	+		Rv2733c	0.67	-0.7
3,046,431	-				-0.2
3,046,445	+				+1.3
3,046,446	-				-0.8
3,046,544	+				+0.0
3,046,683	+				+0.1
3,046,684	-				+0.5
3,046,704	+				+0.4
3,046,704	+				-0.0
3,046,704	+				-0.9
3,046,705	-				-2.2
3,046,705	-				-0.5
3,046,705	-				-0.7
3,046,705	-				+0.8
3,046,721	+				-0.1
3,046,733	+				-1.2
3,046,733	+				-0.9
3,046,734	-				+0.4
3,046,734	-				-0.6
3,046,768	-				-0.2
3,046,912	-		Rv2734	0.11	+1.2
3,046,924	+		Rv2734	0.12	-1.2
3,046,937	-		Rv2734	0.14	+0.3
3,046,959	+		Rv2734	0.16	-0.2
3,046,959	+		Rv2734	0.16	-0.7
3,047,086	+		Rv2734	0.31	-0.8
3,047,086	+		Rv2734	0.31	-1.4
3,047,087	-		Rv2734	0.31	-1.5
3,047,087	-		Rv2734	0.31	-2.8
3,047,117	+		Rv2734	0.35	+0.2
3,047,118	-		Rv2734	0.35	-1.2
3,047,160	+		Rv2734	0.40	-1.8
3,047,160	+		Rv2734	0.40	-0.7
3,047,160	+		Rv2734	0.40	-1.1
3,047,160	+		Rv2734	0.40	+0.4
3,047,161	-		Rv2734	0.40	-0.3
3,047,285	-		Rv2734	0.54	-0.9