Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2687c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
3,003,268	-				-0.2
3,003,336	-				+0.0
3,003,356	+		Rv2686c	0.10	-0.2
3,003,656	+		Rv2686c	0.50	-1.2
3,003,657	-		Rv2686c	0.50	-3.0
3,004,064	-				+0.7
3,004,213	+		Rv2687c	0.25	-0.6
3,004,214	-		Rv2687c	0.25	-1.9
3,004,604	-		Rv2687c	0.80	-1.6
3,004,662	-		Rv2687c	0.88	+0.5
3,004,707	+				-1.1
3,004,805	-				-0.8
3,005,211	+		Rv2688c	0.51	+0.2
3,005,212	-		Rv2688c	0.52	-0.7
3,005,222	+		Rv2688c	0.53	+0.0
3,005,223	-		Rv2688c	0.53	+0.1
3,005,292	+		Rv2688c	0.60	-0.2
3,005,293	-		Rv2688c	0.60	-2.2
3,005,322	+		Rv2688c	0.64	+0.2
3,005,380	-		Rv2688c	0.70	-0.0
3,005,498	+		Rv2688c	0.83	-0.6
3,005,499	-		Rv2688c	0.83	-0.3
3,005,499	-		Rv2688c	0.83	+0.3
3,005,730	+				-0.4