Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2003c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
2,247,580	+				-1.0
2,247,580	+				-0.2
2,247,713	+				-0.5
2,248,376	-				-0.2
2,248,440	+				+1.1
2,248,565	-				+0.1
2,248,593	-				-0.3
2,248,771	+		Rv2003c	0.24	-1.3
2,248,823	-		Rv2003c	0.30	-0.1
2,249,326	-		Rv2003c	0.89	-0.8
2,249,504	-				-0.9
2,249,880	+		Rv2004c	0.27	+0.2
2,250,140	-		Rv2004c	0.44	-0.7