Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1969

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
2,212,019	+		Rv1968	0.32	-0.0
2,212,124	-		Rv1968	0.40	-0.8
2,212,544	+		Rv1968	0.74	-0.3
2,212,544	+		Rv1968	0.74	+0.6
2,212,544	+		Rv1968	0.74	-0.7
2,212,545	-		Rv1968	0.75	+0.0
2,212,545	-		Rv1968	0.75	-0.8
2,213,102	-		Rv1969	0.19	-0.5
2,213,102	-		Rv1969	0.19	-1.2
2,213,216	+		Rv1969	0.28	-0.5
2,213,217	-		Rv1969	0.28	+0.2
2,213,979	+		Rv1969	0.88	-0.3
2,214,163	+				-0.3
2,215,048	-		Rv1970	0.82	-0.0