Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1674c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
1,898,595	-		Rv1673c	0.32	-1.0
1,898,745	+		Rv1673c	0.48	-0.6
1,898,745	+		Rv1673c	0.48	-0.1
1,898,767	-		Rv1673c	0.50	-0.9
1,898,833	+		Rv1673c	0.57	-0.5
1,899,048	+		Rv1673c	0.80	+0.2
1,899,049	-		Rv1673c	0.80	-0.8
1,899,238	-				-1.4
1,899,369	+		Rv1674c	0.17	-1.1
1,899,659	+		Rv1674c	0.61	+0.2
1,899,660	-		Rv1674c	0.61	-0.9
1,899,690	+		Rv1674c	0.65	+0.2
1,899,950	-				-0.5
1,900,180	+				+0.2
1,900,180	+				+0.2
1,900,183	+				-0.5
1,900,183	+				-0.9
1,900,259	+				-0.2
1,900,547	+		Rv1675c	0.42	+0.8
1,900,721	+		Rv1675c	0.65	-0.4