Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1514c

Experiment: 7H9 with hypochlorite 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with hypochlorite 0.4 vol%
1,705,454	+		Rv1513	0.54	+0.8
1,705,525	+		Rv1513	0.64	-0.2
1,705,854	-				-0.3
1,705,859	+				+0.1
1,705,876	+				+0.1
1,706,054	-		Rv1514c	0.31	+1.3
1,706,442	-		Rv1514c	0.80	-0.4
1,706,442	-		Rv1514c	0.80	-1.7
1,706,476	+		Rv1514c	0.85	-0.3
1,706,607	-				-1.7
1,706,677	-				-0.2
1,706,772	-		Rv1515c	0.16	+0.5
1,707,070	-		Rv1515c	0.49	-0.2
1,707,314	+		Rv1515c	0.76	+1.0
1,707,386	+		Rv1515c	0.84	+0.0