Experiment: 7H9 with hypochlorite 0.4 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0848 and Rv0849 overlap by 1 nucleotides Rv0849 and Rv0850 overlap by 4 nucleotides Rv0850 and Rv0851c overlap by 4 nucleotides
Rv0848: Rv0848 - Possible cysteine synthase a CysK2 (O-acetylserine sulfhydrylase) (O-acetylserine (thiol)-lyase) (CSASE), at 944,938 to 946,056
Rv0848
Rv0849: Rv0849 - Probable conserved integral membrane transport protein, at 946,056 to 947,315
Rv0849
Rv0850: Rv0850 - Putative transposase (fragment), at 947,312 to 947,644
Rv0850
Rv0851c: Rv0851c - Probable short-chain type dehydrogenase/reductase, at 947,641 to 948,468
Rv0851c
Position (kb) 946
947
948 Strain fitness (log2 ratio) -1
0
1
2 at 945.104 kb on + strand, within Rv0848 at 945.126 kb on + strand, within Rv0848 at 945.249 kb on + strand, within Rv0848 at 945.682 kb on - strand, within Rv0848 at 945.685 kb on + strand, within Rv0848 at 945.782 kb on - strand, within Rv0848 at 945.910 kb on + strand, within Rv0848 at 945.910 kb on + strand, within Rv0848 at 945.911 kb on - strand, within Rv0848 at 945.923 kb on - strand, within Rv0848 at 945.923 kb on - strand, within Rv0848 at 946.072 kb on + strand at 946.073 kb on - strand at 946.140 kb on + strand at 946.141 kb on - strand at 946.172 kb on - strand at 946.428 kb on + strand, within Rv0849 at 946.488 kb on + strand, within Rv0849 at 946.528 kb on + strand, within Rv0849 at 946.725 kb on + strand, within Rv0849 at 946.746 kb on + strand, within Rv0849 at 946.794 kb on + strand, within Rv0849 at 946.795 kb on - strand, within Rv0849 at 947.109 kb on + strand, within Rv0849 at 947.109 kb on + strand, within Rv0849 at 947.392 kb on - strand, within Rv0850 at 947.742 kb on - strand, within Rv0851c at 947.742 kb on - strand, within Rv0851c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with hypochlorite 0.4 vol% remove 945,104 + Rv0848 0.15 +0.8 945,126 + Rv0848 0.17 -1.0 945,249 + Rv0848 0.28 +0.3 945,682 - Rv0848 0.66 -1.7 945,685 + Rv0848 0.67 +2.2 945,782 - Rv0848 0.75 -1.2 945,910 + Rv0848 0.87 +1.2 945,910 + Rv0848 0.87 -1.3 945,911 - Rv0848 0.87 -0.0 945,923 - Rv0848 0.88 -0.6 945,923 - Rv0848 0.88 -0.8 946,072 + -0.8 946,073 - +1.8 946,140 + +1.2 946,141 - -0.3 946,172 - +0.1 946,428 + Rv0849 0.30 -1.3 946,488 + Rv0849 0.34 -1.3 946,528 + Rv0849 0.37 -0.7 946,725 + Rv0849 0.53 -1.3 946,746 + Rv0849 0.55 +0.5 946,794 + Rv0849 0.59 +0.0 946,795 - Rv0849 0.59 +0.0 947,109 + Rv0849 0.84 -0.3 947,109 + Rv0849 0.84 -0.7 947,392 - Rv0850 0.24 +2.0 947,742 - Rv0851c 0.12 +0.2 947,742 - Rv0851c 0.12 -0.2
Or see this region's nucleotide sequence