Experiment: 7H9 with Nickel (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0255c and Rv0256c are separated by 18 nucleotides Rv0256c and Rv0257 are separated by 151 nucleotides Rv0257 and Rv0258c are separated by 220 nucleotides
Rv0255c: Rv0255c - Probable cobyric acid synthase CobQ1, at 306,374 to 307,858
Rv0255c
Rv0256c: Rv0256c - PPE family protein PPE2, at 307,877 to 309,547
Rv0256c
Rv0257: Rv0257 - Conserved hypothetical protein, at 309,699 to 310,073
Rv0257
Rv0258c: Rv0258c - Conserved hypothetical protein, at 310,294 to 310,749
Rv0258c
Position (kb) 307
308
309
310 Strain fitness (log2 ratio) -2
-1
0
1
2 at 306.911 kb on + strand, within Rv0255c at 306.912 kb on - strand, within Rv0255c at 307.131 kb on - strand, within Rv0255c at 307.188 kb on + strand, within Rv0255c at 307.189 kb on - strand, within Rv0255c at 307.189 kb on - strand, within Rv0255c at 307.261 kb on + strand, within Rv0255c at 307.750 kb on + strand at 307.816 kb on + strand at 307.817 kb on - strand at 308.075 kb on + strand, within Rv0256c at 308.268 kb on + strand, within Rv0256c at 308.268 kb on + strand, within Rv0256c at 308.283 kb on - strand, within Rv0256c at 308.283 kb on - strand, within Rv0256c at 308.674 kb on + strand, within Rv0256c at 308.754 kb on + strand, within Rv0256c at 308.754 kb on + strand, within Rv0256c at 308.754 kb on + strand, within Rv0256c at 308.754 kb on + strand, within Rv0256c at 308.754 kb on + strand, within Rv0256c at 308.755 kb on - strand, within Rv0256c at 308.755 kb on - strand, within Rv0256c at 308.755 kb on - strand, within Rv0256c at 308.816 kb on + strand, within Rv0256c at 308.910 kb on - strand, within Rv0256c at 308.910 kb on - strand, within Rv0256c at 308.910 kb on - strand, within Rv0256c at 308.923 kb on - strand, within Rv0256c at 308.923 kb on - strand, within Rv0256c at 309.078 kb on + strand, within Rv0256c at 309.079 kb on - strand, within Rv0256c at 309.079 kb on - strand, within Rv0256c at 309.331 kb on + strand, within Rv0256c at 309.331 kb on + strand, within Rv0256c at 309.332 kb on - strand, within Rv0256c at 309.332 kb on - strand, within Rv0256c at 309.345 kb on + strand, within Rv0256c at 309.345 kb on + strand, within Rv0256c at 309.495 kb on - strand at 309.598 kb on - strand at 309.631 kb on - strand at 309.631 kb on - strand at 309.763 kb on + strand, within Rv0257 at 309.763 kb on + strand, within Rv0257 at 309.763 kb on + strand, within Rv0257 at 309.764 kb on - strand, within Rv0257 at 309.849 kb on - strand, within Rv0257 at 310.237 kb on - strand at 310.237 kb on - strand at 310.284 kb on - strand at 310.400 kb on + strand, within Rv0258c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Nickel (II) chloride 0.6 mM remove 306,911 + Rv0255c 0.36 +0.0 306,912 - Rv0255c 0.36 +0.4 307,131 - Rv0255c 0.51 -0.9 307,188 + Rv0255c 0.55 +1.5 307,189 - Rv0255c 0.55 -1.1 307,189 - Rv0255c 0.55 -0.8 307,261 + Rv0255c 0.60 +0.2 307,750 + -1.0 307,816 + -2.7 307,817 - -0.0 308,075 + Rv0256c 0.12 +1.8 308,268 + Rv0256c 0.23 -0.9 308,268 + Rv0256c 0.23 +0.1 308,283 - Rv0256c 0.24 -1.5 308,283 - Rv0256c 0.24 -1.1 308,674 + Rv0256c 0.48 -0.6 308,754 + Rv0256c 0.52 -1.9 308,754 + Rv0256c 0.52 -0.2 308,754 + Rv0256c 0.52 +0.4 308,754 + Rv0256c 0.52 -0.7 308,754 + Rv0256c 0.52 -0.0 308,755 - Rv0256c 0.53 -0.6 308,755 - Rv0256c 0.53 -0.4 308,755 - Rv0256c 0.53 -0.8 308,816 + Rv0256c 0.56 -0.1 308,910 - Rv0256c 0.62 -0.5 308,910 - Rv0256c 0.62 -0.5 308,910 - Rv0256c 0.62 +0.5 308,923 - Rv0256c 0.63 -0.5 308,923 - Rv0256c 0.63 +1.2 309,078 + Rv0256c 0.72 -2.1 309,079 - Rv0256c 0.72 -0.6 309,079 - Rv0256c 0.72 -0.1 309,331 + Rv0256c 0.87 -0.9 309,331 + Rv0256c 0.87 -0.2 309,332 - Rv0256c 0.87 -0.3 309,332 - Rv0256c 0.87 -1.0 309,345 + Rv0256c 0.88 +0.2 309,345 + Rv0256c 0.88 -0.8 309,495 - +0.9 309,598 - -0.7 309,631 - -0.5 309,631 - -0.0 309,763 + Rv0257 0.17 +0.7 309,763 + Rv0257 0.17 -0.6 309,763 + Rv0257 0.17 -0.0 309,764 - Rv0257 0.17 +1.8 309,849 - Rv0257 0.40 -1.2 310,237 - -0.4 310,237 - -1.0 310,284 - +0.8 310,400 + Rv0258c 0.23 -0.2
Or see this region's nucleotide sequence