Experiment: 7H9 with Sisomicin 0.07 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0645c and Rv0646c are separated by 46 nucleotides Rv0646c and Rv0647c are separated by 11 nucleotides Rv0647c and Rv0648 are separated by 101 nucleotides
Rv0645c: Rv0645c - Methoxy mycolic acid synthase 1 MmaA1 (methyl mycolic acid synthase 1) (MMA1) (hydroxy mycolic acid synthase), at 739,327 to 740,187
Rv0645c
Rv0646c: Rv0646c - Probable lipase/esterase LipG, at 740,234 to 741,139
Rv0646c
Rv0647c: Rv0647c - Conserved protein, at 741,151 to 742,617
Rv0647c
Rv0648: Rv0648 - Alpha-mannosidase, at 742,719 to 746,366
Rv0648
Position (kb) 741
742
743 Strain fitness (log2 ratio) -2
-1
0
1
2 at 740.166 kb on - strand at 740.168 kb on + strand at 740.168 kb on + strand at 740.168 kb on + strand at 740.169 kb on - strand at 740.213 kb on + strand at 740.213 kb on + strand at 740.213 kb on + strand at 740.213 kb on + strand at 740.214 kb on - strand at 740.214 kb on - strand at 740.214 kb on - strand at 740.214 kb on - strand at 740.534 kb on + strand, within Rv0646c at 740.854 kb on - strand, within Rv0646c at 741.090 kb on + strand at 741.090 kb on + strand at 741.093 kb on + strand at 741.152 kb on + strand at 742.580 kb on + strand at 742.581 kb on - strand at 742.618 kb on + strand at 742.618 kb on + strand at 742.641 kb on + strand at 742.661 kb on + strand at 742.963 kb on + strand at 742.963 kb on + strand at 742.964 kb on - strand at 743.031 kb on + strand at 743.031 kb on + strand at 743.032 kb on - strand at 743.032 kb on - strand at 743.032 kb on - strand at 743.032 kb on - strand at 743.106 kb on + strand, within Rv0648 at 743.175 kb on + strand, within Rv0648 at 743.176 kb on - strand, within Rv0648 at 743.176 kb on - strand, within Rv0648 at 743.347 kb on - strand, within Rv0648 at 743.347 kb on - strand, within Rv0648 at 743.367 kb on + strand, within Rv0648 at 743.367 kb on + strand, within Rv0648 at 743.367 kb on + strand, within Rv0648 at 743.464 kb on - strand, within Rv0648 at 743.505 kb on + strand, within Rv0648 at 743.506 kb on - strand, within Rv0648 at 743.506 kb on - strand, within Rv0648 at 743.506 kb on - strand, within Rv0648 at 743.554 kb on - strand, within Rv0648
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Sisomicin 0.07 mM remove 740,166 - -1.2 740,168 + +1.1 740,168 + +0.1 740,168 + +0.3 740,169 - +2.1 740,213 + -1.7 740,213 + +0.7 740,213 + -0.5 740,213 + +0.4 740,214 - -0.9 740,214 - -1.9 740,214 - -2.0 740,214 - +0.2 740,534 + Rv0646c 0.33 -0.0 740,854 - Rv0646c 0.68 +2.0 741,090 + +1.2 741,090 + -0.1 741,093 + +0.8 741,152 + -0.4 742,580 + -1.9 742,581 - -0.5 742,618 + +0.6 742,618 + -0.2 742,641 + -1.1 742,661 + +0.1 742,963 + -0.3 742,963 + -0.7 742,964 - +1.1 743,031 + -2.1 743,031 + -1.8 743,032 - +1.4 743,032 - -0.4 743,032 - +1.2 743,032 - -1.0 743,106 + Rv0648 0.11 +1.4 743,175 + Rv0648 0.12 +0.3 743,176 - Rv0648 0.13 -1.0 743,176 - Rv0648 0.13 +2.5 743,347 - Rv0648 0.17 -0.2 743,347 - Rv0648 0.17 +0.8 743,367 + Rv0648 0.18 +0.3 743,367 + Rv0648 0.18 +0.6 743,367 + Rv0648 0.18 -0.2 743,464 - Rv0648 0.20 +1.5 743,505 + Rv0648 0.22 -0.4 743,506 - Rv0648 0.22 -0.8 743,506 - Rv0648 0.22 +0.6 743,506 - Rv0648 0.22 -0.5 743,554 - Rv0648 0.23 -0.7
Or see this region's nucleotide sequence