Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3307

Experiment: 7H9 with nitrate 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrate 4 mM
3,693,278	-		Rv3306c	0.40	-1.1
3,693,375	+		Rv3306c	0.48	-2.2
3,693,419	+		Rv3306c	0.52	-1.3
3,693,998	+				-0.2
3,694,040	+				+1.0
3,694,268	+		Rv3307	0.27	-0.9
3,694,349	-		Rv3307	0.37	-0.8
3,694,396	-		Rv3307	0.42	-0.5
3,694,396	-		Rv3307	0.42	+1.6
3,694,396	-		Rv3307	0.42	-0.9
3,694,532	-		Rv3307	0.59	+0.3
3,694,615	+		Rv3307	0.70	-0.5
3,694,615	+		Rv3307	0.70	+0.2
3,694,730	+		Rv3307	0.84	-0.0
3,694,858	+				+0.3
3,695,300	-		Rv3308	0.27	+1.3
3,695,309	-		Rv3308	0.28	+0.2
3,695,452	-		Rv3308	0.37	+0.5
3,695,452	-		Rv3308	0.37	+0.1
3,695,452	-		Rv3308	0.37	+0.0
3,695,578	-		Rv3308	0.44	+0.2