Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1449c

Experiment: 7H9 with nitrate 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrate 4 mM
1,627,227	+		Rv1448c	0.24	-2.0
1,627,228	-		Rv1448c	0.24	-0.0
1,627,357	-		Rv1448c	0.35	-0.8
1,627,854	-		Rv1448c	0.80	-2.4
1,627,896	+		Rv1448c	0.84	-0.6
1,628,034	-				-0.5
1,630,242	-				-1.0
1,630,242	-				-1.2
1,630,275	-				-1.3
1,630,306	+				-1.1
1,630,307	-				-0.2
1,630,393	-				+1.8
1,630,406	+				-0.5
1,630,407	-				-1.6
1,630,456	+				-0.2
1,630,457	-				+0.7
1,630,457	-				-1.5
1,630,640	-				-0.4
1,630,640	-				+0.0
1,630,700	+				-1.3
1,630,701	-				-0.9
1,630,701	-				-0.5
1,631,003	+				+0.0
1,631,004	-				-0.6