Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3759c

Experiment: 7H9 with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 5 mM
4,203,884	+		Rv3758c	0.53	-0.9
4,203,885	-		Rv3758c	0.53	-0.6
4,203,885	-		Rv3758c	0.53	-1.0
4,203,896	+		Rv3758c	0.54	-2.5
4,203,897	-		Rv3758c	0.54	-0.5
4,204,179	+		Rv3758c	0.79	+1.0
4,204,427	+				-0.5
4,204,803	-		Rv3759c	0.40	-0.5
4,204,803	-		Rv3759c	0.40	+0.3
4,205,007	-		Rv3759c	0.61	-1.1
4,205,007	-		Rv3759c	0.61	+1.7
4,205,060	+		Rv3759c	0.67	-0.9
4,205,080	-		Rv3759c	0.69	-0.8
4,205,127	-		Rv3759c	0.74	-0.0
4,205,127	-		Rv3759c	0.74	-2.8
4,205,426	-				-1.7
4,205,719	+		Rv3760	0.60	+0.3
4,205,730	-		Rv3760	0.63	-0.4
4,206,049	-		Rv3761c	0.18	-1.2
4,206,073	+		Rv3761c	0.20	+0.4
4,206,074	-		Rv3761c	0.20	+0.6
4,206,141	+		Rv3761c	0.26	-0.7
4,206,142	-		Rv3761c	0.27	-1.8
4,206,142	-		Rv3761c	0.27	-2.9
4,206,165	+		Rv3761c	0.29	+0.1
4,206,166	-		Rv3761c	0.29	+0.1