Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0939

Experiment: 7H9 with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 5 mM
1,048,005	+		Rv0938	0.82	-0.3
1,048,255	+				-0.2
1,048,290	+				+0.3
1,048,291	-				+0.5
1,048,479	-				-1.2
1,049,136	-		Rv0939	0.37	+0.1
1,049,525	-		Rv0939	0.58	-2.2
1,050,248	+				-0.1
1,050,248	+				+2.2
1,051,318	-		Rv0940c	0.84	+0.4