Experiment: 7H9 with copper (II) chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0867c and Rv0868c are separated by 447 nucleotides Rv0868c and Rv0869c are separated by 3 nucleotides Rv0869c and Rv0870c overlap by 4 nucleotides Rv0870c and Rv0871 are separated by 164 nucleotides
Rv0867c: Rv0867c - Possible resuscitation-promoting factor RpfA, at 964,312 to 965,535
Rv0867c
Rv0868c: Rv0868c - Probable molybdenum cofactor biosynthesis protein D 2 MoaD2 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor, subunit 1), at 965,983 to 966,261
Rv0868c
Rv0869c: Rv0869c - Probable molybdenum cofactor biosynthesis protein A2 MoaA2, at 966,265 to 967,347
Rv0869c
Rv0870c: Rv0870c - Possible conserved integral membrane protein, at 967,344 to 967,733
Rv0870c
Rv0871: Rv0871 - Probable cold shock-like protein B CspB, at 967,898 to 968,305
Rv0871
Position (kb) 966
967
968 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 965.345 kb on + strand, within Rv0867c at 965.465 kb on - strand at 965.517 kb on + strand at 965.517 kb on + strand at 965.518 kb on - strand at 965.518 kb on - strand at 965.535 kb on + strand at 965.536 kb on - strand at 965.536 kb on - strand at 965.536 kb on - strand at 965.536 kb on - strand at 965.540 kb on + strand at 965.544 kb on + strand at 965.629 kb on - strand at 965.629 kb on - strand at 965.629 kb on - strand at 965.668 kb on - strand at 965.668 kb on - strand at 965.845 kb on + strand at 966.004 kb on + strand at 966.005 kb on - strand at 966.005 kb on - strand at 966.005 kb on - strand at 966.007 kb on + strand at 966.007 kb on + strand at 966.007 kb on + strand at 966.074 kb on + strand, within Rv0868c at 966.074 kb on + strand, within Rv0868c at 966.212 kb on + strand, within Rv0868c at 966.673 kb on - strand, within Rv0869c at 966.717 kb on - strand, within Rv0869c at 966.871 kb on - strand, within Rv0869c at 966.871 kb on - strand, within Rv0869c at 966.898 kb on - strand, within Rv0869c at 967.008 kb on + strand, within Rv0869c at 967.008 kb on + strand, within Rv0869c at 967.008 kb on + strand, within Rv0869c at 967.009 kb on - strand, within Rv0869c at 967.009 kb on - strand, within Rv0869c at 967.009 kb on - strand, within Rv0869c at 967.109 kb on - strand, within Rv0869c at 967.109 kb on - strand, within Rv0869c at 967.184 kb on + strand, within Rv0869c at 967.184 kb on + strand, within Rv0869c at 967.185 kb on - strand, within Rv0869c at 967.276 kb on + strand at 967.431 kb on + strand, within Rv0870c at 967.673 kb on - strand, within Rv0870c at 967.673 kb on - strand, within Rv0870c at 967.713 kb on - strand at 967.748 kb on + strand at 967.773 kb on + strand at 967.774 kb on - strand at 967.806 kb on + strand at 967.807 kb on - strand at 967.923 kb on - strand at 967.923 kb on - strand at 967.977 kb on - strand, within Rv0871 at 967.977 kb on - strand, within Rv0871
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with copper (II) chloride 0.08 mM remove 965,345 + Rv0867c 0.84 -0.0 965,465 - -0.9 965,517 + +2.7 965,517 + -1.0 965,518 - -0.0 965,518 - -1.8 965,535 + -2.0 965,536 - -0.5 965,536 - -0.9 965,536 - -0.4 965,536 - -0.7 965,540 + -0.8 965,544 + -2.1 965,629 - +0.2 965,629 - +4.3 965,629 - +0.0 965,668 - -0.0 965,668 - +0.2 965,845 + -1.1 966,004 + +0.5 966,005 - -1.2 966,005 - -2.7 966,005 - -0.2 966,007 + -1.4 966,007 + -0.5 966,007 + -0.3 966,074 + Rv0868c 0.33 +0.8 966,074 + Rv0868c 0.33 -0.3 966,212 + Rv0868c 0.82 +0.2 966,673 - Rv0869c 0.38 +0.2 966,717 - Rv0869c 0.42 -0.4 966,871 - Rv0869c 0.56 -0.7 966,871 - Rv0869c 0.56 -1.8 966,898 - Rv0869c 0.58 -1.5 967,008 + Rv0869c 0.69 -2.1 967,008 + Rv0869c 0.69 +0.7 967,008 + Rv0869c 0.69 -1.3 967,009 - Rv0869c 0.69 -0.7 967,009 - Rv0869c 0.69 -0.8 967,009 - Rv0869c 0.69 +2.7 967,109 - Rv0869c 0.78 -0.9 967,109 - Rv0869c 0.78 +0.0 967,184 + Rv0869c 0.85 -0.5 967,184 + Rv0869c 0.85 -1.2 967,185 - Rv0869c 0.85 -0.7 967,276 + +1.1 967,431 + Rv0870c 0.22 -2.1 967,673 - Rv0870c 0.84 +0.1 967,673 - Rv0870c 0.84 -1.8 967,713 - -0.1 967,748 + +2.3 967,773 + +0.9 967,774 - -0.0 967,806 + -0.0 967,807 - -1.1 967,923 - +0.9 967,923 - -1.5 967,977 - Rv0871 0.19 +1.7 967,977 - Rv0871 0.19 +0.5
Or see this region's nucleotide sequence