Experiment: 7H9 with Ciprofloxacin Hydrochloride 0.001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0632c and Rv0633c are separated by 48 nucleotides Rv0633c and Rv0634c are separated by 153 nucleotides Rv0634c and Rv0634A are separated by 79 nucleotides
Rv0632c: Rv0632c - Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 728,583 to 729,278
Rv0632c
Rv0633c: Rv0633c - Possible exported protein, at 729,327 to 730,166
Rv0633c
Rv0634c: Rv0634c - Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II), at 730,320 to 731,033
Rv0634c
Rv0634A: Rv0634A - Unknown protein, at 731,113 to 731,364
Rv0634A
Position (kb) 729
730
731 Strain fitness (log2 ratio) -2
-1
0
1
2 at 728.360 kb on - strand at 728.360 kb on - strand at 728.360 kb on - strand at 728.540 kb on + strand at 728.585 kb on - strand at 728.908 kb on + strand, within Rv0632c at 728.909 kb on - strand, within Rv0632c at 729.020 kb on - strand, within Rv0632c at 729.257 kb on + strand at 729.260 kb on - strand at 729.260 kb on - strand at 729.328 kb on + strand at 729.508 kb on + strand, within Rv0633c at 729.508 kb on + strand, within Rv0633c at 729.521 kb on + strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.525 kb on + strand, within Rv0633c at 729.526 kb on - strand, within Rv0633c at 729.691 kb on + strand, within Rv0633c at 729.692 kb on - strand, within Rv0633c at 729.694 kb on + strand, within Rv0633c at 729.695 kb on - strand, within Rv0633c at 729.838 kb on + strand, within Rv0633c at 729.905 kb on - strand, within Rv0633c at 729.934 kb on - strand, within Rv0633c at 729.989 kb on - strand, within Rv0633c at 729.989 kb on - strand, within Rv0633c at 730.172 kb on + strand at 730.173 kb on - strand at 730.173 kb on - strand at 730.173 kb on - strand at 730.174 kb on + strand at 730.201 kb on + strand at 730.372 kb on + strand at 730.372 kb on + strand at 730.373 kb on - strand at 730.484 kb on - strand, within Rv0634c at 730.539 kb on + strand, within Rv0634c at 730.539 kb on + strand, within Rv0634c at 730.540 kb on - strand, within Rv0634c at 730.737 kb on + strand, within Rv0634c at 730.738 kb on - strand, within Rv0634c at 730.848 kb on - strand, within Rv0634c at 730.889 kb on - strand, within Rv0634c at 730.889 kb on - strand, within Rv0634c at 731.014 kb on + strand at 731.015 kb on - strand at 731.015 kb on - strand at 731.044 kb on + strand at 731.044 kb on + strand at 731.045 kb on - strand at 731.101 kb on + strand at 731.101 kb on + strand at 731.102 kb on - strand at 731.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ciprofloxacin Hydrochloride 0.001 mM remove 728,360 - -0.6 728,360 - -2.5 728,360 - -0.5 728,540 + -0.4 728,585 - +2.4 728,908 + Rv0632c 0.47 -1.5 728,909 - Rv0632c 0.47 -1.2 729,020 - Rv0632c 0.63 +1.0 729,257 + +2.6 729,260 - -0.3 729,260 - +0.0 729,328 + +0.7 729,508 + Rv0633c 0.22 -0.4 729,508 + Rv0633c 0.22 -0.2 729,521 + Rv0633c 0.23 -0.9 729,522 - Rv0633c 0.23 +0.1 729,522 - Rv0633c 0.23 -0.3 729,522 - Rv0633c 0.23 -0.7 729,525 + Rv0633c 0.24 +0.1 729,526 - Rv0633c 0.24 -0.5 729,691 + Rv0633c 0.43 -2.0 729,692 - Rv0633c 0.43 -0.5 729,694 + Rv0633c 0.44 -0.6 729,695 - Rv0633c 0.44 -0.2 729,838 + Rv0633c 0.61 -0.7 729,905 - Rv0633c 0.69 -0.9 729,934 - Rv0633c 0.72 -0.4 729,989 - Rv0633c 0.79 +0.1 729,989 - Rv0633c 0.79 -0.2 730,172 + -0.3 730,173 - -2.2 730,173 - -0.1 730,173 - +0.4 730,174 + -0.1 730,201 + +2.1 730,372 + +0.9 730,372 + -0.1 730,373 - -0.4 730,484 - Rv0634c 0.23 -0.5 730,539 + Rv0634c 0.31 -0.3 730,539 + Rv0634c 0.31 -1.1 730,540 - Rv0634c 0.31 -0.8 730,737 + Rv0634c 0.58 -0.1 730,738 - Rv0634c 0.59 -0.5 730,848 - Rv0634c 0.74 -2.7 730,889 - Rv0634c 0.80 -0.5 730,889 - Rv0634c 0.80 +0.5 731,014 + +0.0 731,015 - -1.1 731,015 - -0.2 731,044 + -0.2 731,044 + -0.1 731,045 - +0.3 731,101 + +0.2 731,101 + -0.3 731,102 - -1.3 731,102 - -0.6
Or see this region's nucleotide sequence