Experiment: 7H9 with Zinc Pyrithione 0.00072 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0873 and Rv0874c are separated by 88 nucleotides Rv0874c and Rv0875c are separated by 99 nucleotides Rv0875c and Rv0876c overlap by 4 nucleotides
Rv0873: Rv0873 - Probable acyl-CoA dehydrogenase FadE10, at 970,505 to 972,457
Rv0873
Rv0874c: Rv0874c - Conserved hypothetical protein, at 972,546 to 973,706
Rv0874c
Rv0875c: Rv0875c - Possible conserved exported protein, at 973,806 to 974,294
Rv0875c
Rv0876c: Rv0876c - Possible conserved transmembrane protein, at 974,291 to 975,937
Rv0876c
Position (kb) 972
973
974 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 971.854 kb on + strand, within Rv0873 at 971.907 kb on - strand, within Rv0873 at 971.949 kb on + strand, within Rv0873 at 971.960 kb on + strand, within Rv0873 at 971.961 kb on - strand, within Rv0873 at 971.961 kb on - strand, within Rv0873 at 971.961 kb on - strand, within Rv0873 at 972.038 kb on + strand, within Rv0873 at 972.038 kb on + strand, within Rv0873 at 972.039 kb on - strand, within Rv0873 at 972.039 kb on - strand, within Rv0873 at 972.039 kb on - strand, within Rv0873 at 972.118 kb on - strand, within Rv0873 at 972.118 kb on - strand, within Rv0873 at 972.191 kb on + strand, within Rv0873 at 972.191 kb on + strand, within Rv0873 at 972.191 kb on + strand, within Rv0873 at 972.191 kb on + strand, within Rv0873 at 972.192 kb on - strand, within Rv0873 at 972.192 kb on - strand, within Rv0873 at 972.315 kb on - strand at 972.315 kb on - strand at 972.315 kb on - strand at 972.336 kb on + strand at 972.547 kb on + strand at 972.547 kb on + strand at 972.548 kb on - strand at 972.664 kb on - strand, within Rv0874c at 972.798 kb on + strand, within Rv0874c at 972.798 kb on + strand, within Rv0874c at 972.798 kb on + strand, within Rv0874c at 972.798 kb on + strand, within Rv0874c at 972.799 kb on - strand, within Rv0874c at 973.075 kb on - strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.099 kb on + strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 973.100 kb on - strand, within Rv0874c at 974.464 kb on - strand, within Rv0876c at 974.464 kb on - strand, within Rv0876c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Zinc Pyrithione 0.00072 mM remove 971,854 + Rv0873 0.69 -0.7 971,907 - Rv0873 0.72 -0.3 971,949 + Rv0873 0.74 -0.4 971,960 + Rv0873 0.75 -0.3 971,961 - Rv0873 0.75 -0.3 971,961 - Rv0873 0.75 -0.1 971,961 - Rv0873 0.75 -0.6 972,038 + Rv0873 0.78 +0.8 972,038 + Rv0873 0.78 +0.8 972,039 - Rv0873 0.79 -3.6 972,039 - Rv0873 0.79 -0.5 972,039 - Rv0873 0.79 -0.5 972,118 - Rv0873 0.83 -0.3 972,118 - Rv0873 0.83 +0.5 972,191 + Rv0873 0.86 -0.4 972,191 + Rv0873 0.86 -0.4 972,191 + Rv0873 0.86 -1.1 972,191 + Rv0873 0.86 -0.2 972,192 - Rv0873 0.86 -0.3 972,192 - Rv0873 0.86 -0.2 972,315 - -1.5 972,315 - -0.3 972,315 - -0.6 972,336 + +0.2 972,547 + +0.5 972,547 + -0.2 972,548 - -0.2 972,664 - Rv0874c 0.10 -0.3 972,798 + Rv0874c 0.22 +0.0 972,798 + Rv0874c 0.22 +0.1 972,798 + Rv0874c 0.22 -0.4 972,798 + Rv0874c 0.22 -1.0 972,799 - Rv0874c 0.22 +1.7 973,075 - Rv0874c 0.46 -0.1 973,099 + Rv0874c 0.48 -1.3 973,099 + Rv0874c 0.48 -2.4 973,099 + Rv0874c 0.48 -0.8 973,099 + Rv0874c 0.48 -0.1 973,099 + Rv0874c 0.48 -0.4 973,099 + Rv0874c 0.48 -0.8 973,100 - Rv0874c 0.48 -1.2 973,100 - Rv0874c 0.48 -0.2 973,100 - Rv0874c 0.48 -1.0 973,100 - Rv0874c 0.48 +1.8 973,100 - Rv0874c 0.48 -0.3 973,100 - Rv0874c 0.48 -1.3 974,464 - Rv0876c 0.11 -1.2 974,464 - Rv0876c 0.11 +0.1
Or see this region's nucleotide sequence