Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05675

Experiment: McCas low carbon steel planktonic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas low carbon steel planktonic
1,056,831	+				+0.0
1,056,831	+				+0.0
1,056,831	+				-0.0
1,056,851	-				+1.3
1,056,886	-				+0.0
1,056,890	-				+0.0
1,056,891	+				-0.2
1,056,969	-		MMJJ_RS05665	0.10	+0.1
1,057,070	-		MMJJ_RS05665	0.25	-0.4
1,057,071	+		MMJJ_RS05665	0.25	+1.0
1,057,092	-		MMJJ_RS05665	0.28	+0.0
1,057,092	-		MMJJ_RS05665	0.28	+0.2
1,057,092	-		MMJJ_RS05665	0.28	-0.1
1,057,093	+		MMJJ_RS05665	0.29	-0.0
1,057,115	-		MMJJ_RS05665	0.32	-0.1
1,057,116	+		MMJJ_RS05665	0.32	-0.7
1,057,116	+		MMJJ_RS05665	0.32	-0.0
1,057,116	+		MMJJ_RS05665	0.32	-0.3
1,057,120	-		MMJJ_RS05665	0.32	-0.2
1,057,121	+		MMJJ_RS05665	0.33	+0.4
1,057,124	-		MMJJ_RS05665	0.33	-0.0
1,057,124	-		MMJJ_RS05665	0.33	+0.6
1,057,125	+		MMJJ_RS05665	0.33	+0.0
1,057,125	+		MMJJ_RS05665	0.33	-0.2
1,057,147	+		MMJJ_RS05665	0.36	-0.0
1,057,172	-		MMJJ_RS05665	0.40	+1.3
1,057,172	-		MMJJ_RS05665	0.40	+0.1
1,057,172	-		MMJJ_RS05665	0.40	-0.1
1,057,173	+		MMJJ_RS05665	0.40	-0.2
1,057,261	-		MMJJ_RS05665	0.53	+0.1
1,057,262	+		MMJJ_RS05665	0.53	+0.0
1,057,262	+		MMJJ_RS05665	0.53	-0.1
1,057,278	-		MMJJ_RS05665	0.56	-0.1
1,057,282	-		MMJJ_RS05665	0.56	-0.0
1,057,282	-		MMJJ_RS05665	0.56	+0.3
1,057,325	-		MMJJ_RS05665	0.62	-0.1
1,057,332	-		MMJJ_RS05665	0.63	-0.1
1,057,332	-		MMJJ_RS05665	0.63	+0.1
1,057,449	-		MMJJ_RS05665	0.81	+0.4
1,057,450	+		MMJJ_RS05665	0.81	+0.7
1,057,450	+		MMJJ_RS05665	0.81	-0.2
1,057,460	+		MMJJ_RS05665	0.82	+0.4
1,057,480	-		MMJJ_RS05665	0.85	-0.4
1,057,481	+		MMJJ_RS05665	0.85	-0.3
1,057,516	+				-0.1
1,057,531	-				+0.4
1,057,531	-				+0.2
1,057,531	-				+0.2
1,057,539	+				+1.3
1,057,545	+				-0.2
1,057,896	-				+0.3
1,057,897	+				+0.3
1,057,898	-				+0.1
1,057,899	+				-0.6
1,057,914	-				-0.2
1,057,915	+				-0.8
1,057,943	-		MMJJ_RS05675	0.13	+0.1
1,057,943	-		MMJJ_RS05675	0.13	-0.2
1,057,943	-		MMJJ_RS05675	0.13	-0.8
1,058,059	-		MMJJ_RS05675	0.24	+0.3
1,058,060	+		MMJJ_RS05675	0.24	+0.2
1,058,066	-		MMJJ_RS05675	0.25	+0.2
1,058,066	-		MMJJ_RS05675	0.25	-0.6
1,058,079	-		MMJJ_RS05675	0.26	+0.4
1,058,079	-		MMJJ_RS05675	0.26	-0.4
1,058,080	+		MMJJ_RS05675	0.26	+0.1
1,058,117	-		MMJJ_RS05675	0.30	-0.5
1,058,127	-		MMJJ_RS05675	0.31	-0.1
1,058,128	+		MMJJ_RS05675	0.31	+0.3
1,058,128	+		MMJJ_RS05675	0.31	+0.1
1,058,128	+		MMJJ_RS05675	0.31	-0.4
1,058,134	-		MMJJ_RS05675	0.32	-0.2
1,058,134	-		MMJJ_RS05675	0.32	-0.6
1,058,149	+		MMJJ_RS05675	0.33	-0.1
1,058,195	-		MMJJ_RS05675	0.38	+0.9
1,058,195	-		MMJJ_RS05675	0.38	-0.1
1,058,195	-		MMJJ_RS05675	0.38	-0.9
1,058,198	+		MMJJ_RS05675	0.38	-0.8
1,058,208	-		MMJJ_RS05675	0.39	-0.1
1,058,252	-		MMJJ_RS05675	0.44	-0.3
1,058,255	-		MMJJ_RS05675	0.44	+0.2
1,058,306	-		MMJJ_RS05675	0.49	-0.1
1,058,329	-		MMJJ_RS05675	0.51	+1.6
1,058,330	+		MMJJ_RS05675	0.51	-0.0
1,058,330	+		MMJJ_RS05675	0.51	-0.4
1,058,330	+		MMJJ_RS05675	0.51	+0.2
1,058,330	+		MMJJ_RS05675	0.51	-0.2
1,058,354	-		MMJJ_RS05675	0.54	-0.6
1,058,355	+		MMJJ_RS05675	0.54	+0.3
1,058,358	-		MMJJ_RS05675	0.54	-0.6
1,058,363	-		MMJJ_RS05675	0.55	-0.1
1,058,364	+		MMJJ_RS05675	0.55	-0.8
1,058,468	-		MMJJ_RS05675	0.65	-0.6
1,058,469	+		MMJJ_RS05675	0.65	-0.1
1,058,504	-		MMJJ_RS05675	0.69	+0.5
1,058,504	-		MMJJ_RS05675	0.69	+0.4
1,058,532	-		MMJJ_RS05675	0.72	-0.1
1,058,532	-		MMJJ_RS05675	0.72	-0.7
1,058,532	-		MMJJ_RS05675	0.72	+0.1
1,058,532	-		MMJJ_RS05675	0.72	-0.0
1,058,532	-		MMJJ_RS05675	0.72	+0.4
1,058,533	+		MMJJ_RS05675	0.72	-0.6
1,058,533	+		MMJJ_RS05675	0.72	-0.4
1,058,533	+		MMJJ_RS05675	0.72	+0.3
1,058,533	+		MMJJ_RS05675	0.72	-0.4
1,058,533	+		MMJJ_RS05675	0.72	-0.3
1,058,536	-		MMJJ_RS05675	0.72	-1.4
1,058,536	-		MMJJ_RS05675	0.72	+0.4
1,058,536	-		MMJJ_RS05675	0.72	+0.3
1,058,650	+		MMJJ_RS05675	0.83	+0.3
1,058,655	-		MMJJ_RS05675	0.84	+0.4
1,058,656	+		MMJJ_RS05675	0.84	-0.1
1,058,733	-				-0.6
1,058,733	-				-0.1
1,058,734	+				-0.2
1,058,745	-				+0.0
1,058,746	+				-0.5
1,058,746	+				+0.5
1,058,753	-				-0.1
1,058,754	+				+0.9
1,058,754	+				+0.2
1,058,754	+				-0.1
1,058,758	-				-0.6
1,058,758	-				+0.3
1,058,759	+				-0.3
1,058,777	-				-0.2
1,058,777	-				+0.0
1,058,777	-				+0.7
1,058,777	-				+0.2
1,058,777	-				-0.4
1,058,778	+				-0.5
1,058,778	+				-0.4
1,058,780	+				-0.5
1,058,780	+				+0.6
1,058,808	-				-0.3
1,058,808	-				-0.4
1,058,808	-				+0.0
1,058,808	-				+0.0
1,058,857	-		MMJJ_RS05680	0.12	-0.1
1,058,882	+		MMJJ_RS05680	0.24	+1.0
1,058,906	-		MMJJ_RS05680	0.36	+0.1
1,058,907	+		MMJJ_RS05680	0.37	-0.2
1,058,907	+		MMJJ_RS05680	0.37	+0.3
1,058,911	-		MMJJ_RS05680	0.39	-0.3
1,058,936	-		MMJJ_RS05680	0.52	+0.7
1,058,936	-		MMJJ_RS05680	0.52	+0.0
1,058,937	+		MMJJ_RS05680	0.52	-0.0
1,058,937	+		MMJJ_RS05680	0.52	-0.0
1,058,950	-		MMJJ_RS05680	0.59	+0.0
1,058,950	-		MMJJ_RS05680	0.59	-0.5
1,058,951	+		MMJJ_RS05680	0.59	-0.8
1,058,951	+		MMJJ_RS05680	0.59	-0.4
1,058,951	+		MMJJ_RS05680	0.59	+0.4
1,058,953	-		MMJJ_RS05680	0.60	-0.0
1,058,953	-		MMJJ_RS05680	0.60	-0.2
1,058,953	-		MMJJ_RS05680	0.60	-0.2
1,058,953	-		MMJJ_RS05680	0.60	-0.2
1,058,953	-		MMJJ_RS05680	0.60	+0.1
1,058,953	-		MMJJ_RS05680	0.60	-0.5
1,058,953	-		MMJJ_RS05680	0.60	+0.1
1,058,953	-		MMJJ_RS05680	0.60	-0.2
1,058,953	-		MMJJ_RS05680	0.60	+0.2
1,058,953	-		MMJJ_RS05680	0.60	-0.1
1,058,953	-		MMJJ_RS05680	0.60	-0.0
1,058,953	-		MMJJ_RS05680	0.60	-0.3
1,058,954	+		MMJJ_RS05680	0.61	+0.3
1,058,954	+		MMJJ_RS05680	0.61	-0.7
1,058,954	+		MMJJ_RS05680	0.61	+0.3
1,058,954	+		MMJJ_RS05680	0.61	-0.1
1,058,954	+		MMJJ_RS05680	0.61	+0.1
1,058,954	+		MMJJ_RS05680	0.61	-0.1
1,058,954	+		MMJJ_RS05680	0.61	-0.3
1,058,954	+		MMJJ_RS05680	0.61	+0.5
1,058,954	+		MMJJ_RS05680	0.61	+0.1
1,058,955	-		MMJJ_RS05680	0.61	-0.2
1,058,955	-		MMJJ_RS05680	0.61	+0.3
1,058,955	-		MMJJ_RS05680	0.61	+0.0
1,058,956	+		MMJJ_RS05680	0.62	+0.3
1,058,956	+		MMJJ_RS05680	0.62	-0.0
1,058,956	+		MMJJ_RS05680	0.62	+0.2
1,058,965	-		MMJJ_RS05680	0.66	-0.1
1,058,965	-		MMJJ_RS05680	0.66	-0.2
1,058,966	+		MMJJ_RS05680	0.67	-0.0
1,058,969	-		MMJJ_RS05680	0.68	+0.2
1,058,969	-		MMJJ_RS05680	0.68	+0.4
1,058,969	-		MMJJ_RS05680	0.68	-0.1
1,058,969	-		MMJJ_RS05680	0.68	+0.0
1,058,969	-		MMJJ_RS05680	0.68	+0.2
1,058,969	-		MMJJ_RS05680	0.68	-0.0
1,058,970	+		MMJJ_RS05680	0.69	-0.8
1,058,970	+		MMJJ_RS05680	0.69	+0.1
1,058,970	+		MMJJ_RS05680	0.69	+0.1
1,058,970	+		MMJJ_RS05680	0.69	-1.0
1,058,970	+		MMJJ_RS05680	0.69	+0.0
1,058,970	+		MMJJ_RS05680	0.69	+0.4
1,058,970	+		MMJJ_RS05680	0.69	+0.4
1,058,970	+		MMJJ_RS05680	0.69	+0.1
1,058,970	+		MMJJ_RS05680	0.69	-0.2
1,058,970	+		MMJJ_RS05680	0.69	-0.1
1,058,970	+		MMJJ_RS05680	0.69	-0.5
1,058,970	+		MMJJ_RS05680	0.69	+0.1
1,058,970	+		MMJJ_RS05680	0.69	+0.0
1,058,970	+		MMJJ_RS05680	0.69	-0.1
1,058,971	-		MMJJ_RS05680	0.69	-0.2
1,058,971	-		MMJJ_RS05680	0.69	-0.1
1,058,971	-		MMJJ_RS05680	0.69	-0.2
1,058,972	+		MMJJ_RS05680	0.70	+0.3
1,058,972	+		MMJJ_RS05680	0.70	+0.0
1,058,972	+		MMJJ_RS05680	0.70	+0.3
1,058,972	+		MMJJ_RS05680	0.70	+0.2
1,058,972	+		MMJJ_RS05680	0.70	-0.1
1,058,973	-		MMJJ_RS05680	0.70	-0.9
1,058,973	-		MMJJ_RS05680	0.70	-0.3
1,058,973	-		MMJJ_RS05680	0.70	-0.7
1,058,974	+		MMJJ_RS05680	0.71	-0.2
1,058,974	+		MMJJ_RS05680	0.71	+0.1
1,058,974	+		MMJJ_RS05680	0.71	-0.1
1,058,974	+		MMJJ_RS05680	0.71	+0.2
1,058,978	-		MMJJ_RS05680	0.73	-0.1
1,058,978	-		MMJJ_RS05680	0.73	-0.3
1,058,978	-		MMJJ_RS05680	0.73	+0.2
1,058,978	-		MMJJ_RS05680	0.73	+0.0
1,058,978	-		MMJJ_RS05680	0.73	+0.0
1,058,979	+		MMJJ_RS05680	0.73	-0.6
1,058,979	+		MMJJ_RS05680	0.73	+0.6
1,058,979	+		MMJJ_RS05680	0.73	-0.2
1,058,979	+		MMJJ_RS05680	0.73	+0.2
1,058,979	+		MMJJ_RS05680	0.73	+0.5
1,058,981	-		MMJJ_RS05680	0.74	+0.2
1,058,982	+		MMJJ_RS05680	0.75	-0.2
1,058,982	+		MMJJ_RS05680	0.75	+0.0
1,058,983	-		MMJJ_RS05680	0.75	-0.1
1,058,984	+		MMJJ_RS05680	0.76	+0.1
1,059,008	-		MMJJ_RS05680	0.88	+0.4
1,059,008	-		MMJJ_RS05680	0.88	+0.1
1,059,031	-				-0.7
1,059,032	+				+0.1
1,059,352	-				+0.3
1,059,352	-				-0.2
1,059,352	-				+0.1
1,059,352	-				+0.0
1,059,352	-				-0.1
1,059,353	+				+0.2
1,059,353	+				+0.1
1,059,353	+				-0.0
1,059,353	+				-0.7
1,059,353	+				+0.2
1,059,353	+				+0.5
1,059,353	+				+0.2
1,059,353	+				+1.4
1,059,353	+				-0.1
1,059,355	+				+0.2
1,059,356	-				+0.5
1,059,356	-				+0.2
1,059,357	+				+0.2
1,059,357	+				+0.0
1,059,364	-				+0.2
1,059,364	-				+0.0
1,059,376	-				+0.0
1,059,384	-				-0.0
1,059,388	-				+0.2
1,059,389	+				+0.4
1,059,389	+				+0.0
1,059,390	-				-0.2
1,059,390	-				-0.1
1,059,390	-				+0.1
1,059,390	-				+0.1
1,059,391	+				+0.1
1,059,391	+				+0.1
1,059,391	+				-0.6
1,059,391	+				-0.1
1,059,391	+				-0.1
1,059,391	+				-0.6
1,059,392	-				-0.3
1,059,392	-				+0.0
1,059,393	+				-0.2
1,059,393	+				+0.2
1,059,393	+				+0.1
1,059,393	+				+0.0
1,059,393	+				+0.3
1,059,394	-				-0.6
1,059,394	-				-0.1
1,059,394	-				-0.2
1,059,395	+				-0.6
1,059,395	+				+0.0
1,059,401	-				+0.0
1,059,402	+				-0.2
1,059,424	-				-0.2
1,059,424	-				+0.2
1,059,424	-				-0.0
1,059,424	-				-0.6
1,059,425	+				+0.4
1,059,425	+				-0.4
1,059,426	-				-0.3
1,059,426	-				-0.4
1,059,444	-				+0.1
1,059,444	-				-0.5
1,059,467	+				-0.2
1,059,487	-		MMJJ_RS05685	0.17	-0.1
1,059,504	+		MMJJ_RS05685	0.25	+0.5
1,059,546	-		MMJJ_RS05685	0.43	+0.1
1,059,546	-		MMJJ_RS05685	0.43	-0.0
1,059,546	-		MMJJ_RS05685	0.43	-0.1
1,059,546	-		MMJJ_RS05685	0.43	+0.3
1,059,546	-		MMJJ_RS05685	0.43	-0.4
1,059,547	+		MMJJ_RS05685	0.43	-0.3
1,059,547	+		MMJJ_RS05685	0.43	+0.2
1,059,552	-		MMJJ_RS05685	0.45	+0.4
1,059,585	+		MMJJ_RS05685	0.60	-0.2
1,059,614	-		MMJJ_RS05685	0.72	-0.3
1,059,620	+		MMJJ_RS05685	0.75	+0.2
1,059,620	+				+0.6
1,059,659	-				-0.1
1,059,659	-				+0.1
1,059,660	+				-0.3
1,059,663	+				-0.4
1,059,691	+				+0.2
1,059,713	-				+0.2
1,059,718	-				+0.5
1,059,728	-				-0.0
1,059,728	-				+0.1
1,059,729	+				+0.5
1,059,729	+				-0.1
1,059,734	-				-0.2
1,059,735	+				+0.2
1,059,743	-				+0.0
1,059,743	-				+0.0
1,059,745	-				-0.1
1,059,745	-				+0.1
1,059,745	-				+0.2
1,059,745	-				-0.1
1,059,745	-				-0.2
1,059,746	+				+0.1
1,059,746	+				-0.3
1,059,808	-				+0.5
1,059,809	+				+0.1
1,059,810	-				-0.2
1,059,811	+				+0.1
1,059,813	-				+0.3
1,059,813	-				-1.7
1,059,814	+				-0.2
1,059,814	+				-0.1
1,059,815	-				-0.2
1,059,815	-				+0.3
1,059,815	-				+0.0
1,059,816	+				-0.3
1,059,816	+				-0.1