Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2945c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
3,289,849	+				+0.8
3,290,831	+		Rv2945c	0.29	-1.9
3,290,832	-		Rv2945c	0.30	-0.4
3,290,832	-		Rv2945c	0.30	-1.6
3,290,842	+		Rv2945c	0.31	-1.4
3,290,987	+		Rv2945c	0.52	-1.5
3,291,018	+		Rv2945c	0.56	-1.3
3,291,018	+		Rv2945c	0.56	-1.6
3,291,018	+		Rv2945c	0.56	-1.4
3,291,019	-		Rv2945c	0.56	-2.4
3,291,027	-		Rv2945c	0.57	-1.4
3,291,076	+		Rv2945c	0.64	+0.9
3,291,076	+		Rv2945c	0.64	-0.5
3,291,076	+		Rv2945c	0.64	-1.2
3,291,076	+		Rv2945c	0.64	-1.9
3,291,076	+		Rv2945c	0.64	-1.9
3,291,077	-		Rv2945c	0.65	-1.5
3,291,119	+		Rv2945c	0.71	-2.7
3,291,278	+				-1.2
3,291,278	+				-1.7
3,291,278	+				-0.2
3,291,278	+				-1.9
3,291,278	+				-1.5
3,291,279	-				-1.6
3,291,279	-				-1.3
3,291,279	-				-0.5
3,291,279	-				-2.4
3,291,279	-				-0.6
3,291,336	+				-2.0
3,291,337	-				+0.6
3,291,519	-				+0.7
3,291,519	-				+0.6
3,291,604	-				+0.1
3,291,806	+				-1.4
3,291,807	-				-0.6
3,291,968	+				+0.1