Experiment: 7H9 with Levofloxacin 0.3 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0262c and Rv0263c are separated by 9 nucleotides Rv0263c and Rv0264c are separated by 16 nucleotides Rv0264c and Rv0265c are separated by 95 nucleotides
Rv0262c: Rv0262c - Aminoglycoside 2'-N-acetyltransferase Aac (Aac(2')-IC), at 314,309 to 314,854
Rv0262c
Rv0263c: Rv0263c - Conserved hypothetical protein, at 314,864 to 315,766
Rv0263c
Rv0264c: Rv0264c - Conserved hypothetical protein, at 315,783 to 316,415
Rv0264c
Rv0265c: Rv0265c - Probable periplasmic iron-transport lipoprotein, at 316,511 to 317,503
Rv0265c
Position (kb) 315
316
317 Strain fitness (log2 ratio) -2
-1
0
1 at 314.880 kb on - strand at 315.117 kb on - strand, within Rv0263c at 315.178 kb on + strand, within Rv0263c at 315.178 kb on + strand, within Rv0263c at 315.424 kb on - strand, within Rv0263c at 315.908 kb on - strand, within Rv0264c at 315.908 kb on - strand, within Rv0264c at 315.908 kb on - strand, within Rv0264c at 315.909 kb on + strand, within Rv0264c at 316.502 kb on - strand at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.092 kb on - strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.141 kb on + strand, within Rv0265c at 317.142 kb on - strand, within Rv0265c at 317.186 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.382 kb on - strand, within Rv0265c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Levofloxacin 0.3 ug/mL remove 314,880 - -0.7 315,117 - Rv0263c 0.28 -1.3 315,178 + Rv0263c 0.35 -0.2 315,178 + Rv0263c 0.35 -1.0 315,424 - Rv0263c 0.62 -0.6 315,908 - Rv0264c 0.20 -0.5 315,908 - Rv0264c 0.20 -0.0 315,908 - Rv0264c 0.20 -1.1 315,909 + Rv0264c 0.20 -1.8 316,502 - -2.7 317,091 + Rv0265c 0.58 -0.9 317,091 + Rv0265c 0.58 -0.4 317,091 + Rv0265c 0.58 +0.0 317,092 - Rv0265c 0.59 -0.6 317,095 + Rv0265c 0.59 -0.1 317,095 + Rv0265c 0.59 -0.2 317,096 - Rv0265c 0.59 -0.6 317,096 - Rv0265c 0.59 -1.0 317,096 - Rv0265c 0.59 +0.2 317,141 + Rv0265c 0.63 +0.6 317,142 - Rv0265c 0.64 -0.8 317,186 + Rv0265c 0.68 +0.4 317,377 + Rv0265c 0.87 -0.0 317,377 + Rv0265c 0.87 -0.4 317,378 - Rv0265c 0.87 -0.8 317,378 - Rv0265c 0.87 -0.4 317,382 - Rv0265c 0.88 +0.6
Or see this region's nucleotide sequence