Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2809

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
3,114,531	+		Rv2807	0.76	+0.2
3,114,531	+		Rv2807	0.76	-0.5
3,114,567	+		Rv2807	0.79	-1.6
3,114,568	-		Rv2807	0.79	+0.6
3,114,810	+				+0.7
3,114,835	+				+0.2
3,114,835	+				-0.1
3,114,835	+				-1.2
3,115,319	+				+0.1
3,115,340	-				+0.9
3,115,394	-				+2.0
3,115,431	+				+0.9
3,115,604	+		Rv2809	0.63	-1.1
3,115,605	-		Rv2809	0.63	-0.3
3,115,647	+		Rv2809	0.77	-1.0
3,115,648	-		Rv2809	0.77	-0.5
3,115,837	+		Rv2810c	0.24	+0.3
3,115,957	+		Rv2810c	0.54	-0.2
3,115,958	-		Rv2810c	0.54	-0.4
3,115,958	-		Rv2810c	0.54	-1.1
3,115,960	+		Rv2810c	0.54	+0.7