Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3072c

Experiment: 7H9 with Linezolid 0.44 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.44 ug/mL
3,434,896	+		Rv3071	0.39	-0.5
3,434,896	+		Rv3071	0.39	-0.1
3,434,896	+		Rv3071	0.39	+0.5
3,434,897	-		Rv3071	0.39	-1.1
3,435,345	+		Rv3071	0.79	-0.4
3,435,365	+		Rv3071	0.81	+0.3
3,435,381	+		Rv3071	0.83	+0.1
3,435,381	+		Rv3071	0.83	-0.6
3,435,845	-				+0.0
3,435,949	-		Rv3072c	0.29	-0.2
3,436,144	+		Rv3072c	0.66	-0.7
3,436,145	-		Rv3072c	0.66	-1.4
3,436,269	+		Rv3072c	0.90	-0.2
3,436,270	-				+0.7
3,436,472	-		Rv3073c	0.40	-0.4
3,436,649	-		Rv3073c	0.90	-0.6
3,436,696	+				-0.6
3,436,699	-				-1.6
3,436,860	-				+0.2
3,437,162	-		Rv3074	0.30	+0.3
3,437,174	-		Rv3074	0.31	+3.8
3,437,174	-		Rv3074	0.31	-1.3
3,437,174	-		Rv3074	0.31	+0.0
3,437,174	-		Rv3074	0.31	-0.4
3,437,245	-		Rv3074	0.37	-0.7
3,437,300	+		Rv3074	0.41	-1.3
3,437,300	+		Rv3074	0.41	+0.0
3,437,300	+		Rv3074	0.41	-0.0