Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2761c

Experiment: 7H9 with Linezolid 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.3 ug/mL
3,070,747	+		Rv2758c	0.61	+1.4
3,070,826	+				-1.1
3,070,901	+				-0.5
3,070,961	-		Rv2759c	0.22	+0.2
3,070,966	+		Rv2759c	0.23	+0.0
3,070,966	+		Rv2759c	0.23	+0.2
3,070,966	+		Rv2759c	0.23	+0.1
3,070,966	+		Rv2759c	0.23	-0.8
3,070,966	+		Rv2759c	0.23	-0.1
3,070,967	-		Rv2759c	0.23	-0.3
3,070,967	-		Rv2759c	0.23	-0.0
3,071,015	-		Rv2759c	0.35	-0.5
3,071,158	+		Rv2759c	0.71	-0.3
3,071,159	-		Rv2759c	0.72	-0.8
3,071,159	-		Rv2759c	0.72	-0.2
3,071,292	+				+0.2
3,071,293	-				-0.2
3,071,525	-				-0.5
3,071,525	-				-0.3
3,071,525	-				+0.8
3,071,525	-				+0.4
3,072,039	+		Rv2761c	0.45	-0.4
3,072,040	-		Rv2761c	0.45	-0.1
3,072,117	+		Rv2761c	0.52	+1.6
3,072,118	-		Rv2761c	0.52	-0.6
3,072,118	-		Rv2761c	0.52	-1.6
3,072,118	-		Rv2761c	0.52	-0.6
3,072,345	+		Rv2761c	0.73	-0.3
3,072,346	-		Rv2761c	0.73	-2.1
3,072,441	+		Rv2761c	0.82	-1.5
3,072,523	-		Rv2761c	0.89	-0.1
3,072,574	+				+0.0
3,072,605	+				-0.4
3,072,611	+				+0.5
3,072,778	+		Rv2762c	0.34	-0.1