Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2555c

Experiment: 7H9 with Linezolid 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.3 ug/mL
2,872,875	-		Rv2553c	0.69	-2.0
2,876,512	-				-0.1
2,876,541	-				-0.1
2,876,541	-				-0.3
2,876,743	-		Rv2556c	0.43	+0.0
2,876,837	-		Rv2556c	0.67	-0.4
2,876,989	+				-0.1
2,876,990	-				-0.8
2,877,067	-				-0.8
2,877,147	-		Rv2557	0.11	+0.2
2,877,147	-		Rv2557	0.11	+0.1
2,877,204	-		Rv2557	0.20	+0.0
2,877,242	-		Rv2557	0.25	-2.0
2,877,332	-		Rv2557	0.39	+0.3
2,877,478	+		Rv2557	0.60	-0.1
2,877,478	+		Rv2557	0.60	-0.3
2,877,479	-		Rv2557	0.60	-0.5