Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1158c

Experiment: 7H9 with Linezolid 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.3 ug/mL
1,284,426	-		Rv1158c	0.36	+1.6
1,284,510	-		Rv1158c	0.48	-0.1
1,284,551	+		Rv1158c	0.54	-0.5
1,284,800	+				+0.5
1,284,801	-				+0.2
1,284,801	-				-0.0
1,284,943	-				-0.7
1,284,943	-				-0.5
1,284,953	+				+0.1
1,285,050	+				-0.2
1,285,050	+				-0.1
1,285,050	+				-0.5
1,285,253	+		Rv1159	0.20	-2.9
1,285,381	-		Rv1159	0.30	-1.1
1,285,754	+		Rv1159	0.59	+0.2