Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0854

Experiment: 7H9 with Linezolid 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.3 ug/mL
950,314	-		Rv0853c	0.52	-0.8
950,597	+		Rv0853c	0.69	-3.0
950,597	+		Rv0853c	0.69	-0.5
950,597	+		Rv0853c	0.69	-0.3
950,597	+		Rv0853c	0.69	+0.1
950,597	+		Rv0853c	0.69	+0.7
950,598	-		Rv0853c	0.69	-1.5
950,598	-		Rv0853c	0.69	+0.8
950,598	-		Rv0853c	0.69	-0.3
950,598	-		Rv0853c	0.69	+1.0
951,003	+				+0.2
951,060	-				+1.1
951,060	-				+1.7
951,078	+				+0.6
951,078	+				-0.2
951,130	+				-0.1
951,131	-				-0.7
951,146	+				+0.0
951,171	+				+1.7
951,208	+				-2.4
951,208	+				-0.1
951,208	+				-0.9
951,209	-				-0.8
951,213	-				+0.3
951,388	-		Rv0854	0.46	-0.1
951,388	-		Rv0854	0.46	+1.0
951,388	-		Rv0854	0.46	-0.0
951,389	+		Rv0854	0.46	-0.1
951,389	+		Rv0854	0.46	+0.8
951,389	+		Rv0854	0.46	-0.7
951,459	+		Rv0854	0.62	-0.2
952,025	+		Rv0855	0.36	+0.4
952,154	+		Rv0855	0.48	-0.2
952,308	-		Rv0855	0.63	-0.2
952,337	+		Rv0855	0.65	-1.0
952,337	+		Rv0855	0.65	-0.8
952,338	-		Rv0855	0.65	+0.3
952,338	-		Rv0855	0.65	+0.2
952,338	-		Rv0855	0.65	-0.3
952,451	+		Rv0855	0.76	-0.7
952,451	+		Rv0855	0.76	-2.5
952,452	-		Rv0855	0.76	-0.4
952,452	-		Rv0855	0.76	+0.6
952,452	-		Rv0855	0.76	-0.5
952,531	+		Rv0855	0.83	-0.2
952,531	+		Rv0855	0.83	-0.2