Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2970c

Experiment: 7H9 with Linezolid 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.3 ug/mL
3,324,545	-				+0.1
3,324,550	-				-0.5
3,324,585	-				+0.0
3,324,731	-		Rv2970c	0.14	-0.4
3,324,862	+		Rv2970c	0.26	+0.6
3,324,862	+		Rv2970c	0.26	+1.3
3,324,862	+		Rv2970c	0.26	+0.1
3,324,863	-		Rv2970c	0.26	-0.1
3,325,001	-		Rv2970c	0.38	-1.1
3,325,125	+		Rv2970c	0.49	+0.8
3,325,138	+		Rv2970c	0.50	+0.6
3,325,139	-		Rv2970c	0.50	+1.3
3,325,139	-		Rv2970c	0.50	+0.3
3,325,139	-		Rv2970c	0.50	-0.3
3,325,200	+		Rv2970c	0.55	-1.8
3,325,200	+		Rv2970c	0.55	+2.0
3,325,286	-		Rv2970c	0.63	-0.3
3,325,328	-		Rv2970c	0.67	-0.6
3,325,417	-		Rv2970c	0.75	-0.4
3,325,809	-				-0.3
3,325,809	-				-2.1
3,325,845	+				-1.2
3,325,892	+				-0.2
3,325,951	+		Rv2970A	0.10	-0.3