Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08760

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,613,102	-				-0.2
1,613,149	-				-5.5
1,613,149	-				-3.0
1,613,149	-				+0.1
1,613,150	+				-0.1
1,613,150	+				-0.6
1,613,154	-				+0.8
1,613,154	-				-1.9
1,613,154	-				-0.4
1,613,154	-				-0.6
1,613,155	+				-4.6
1,613,155	+				-1.1
1,613,155	+				-1.3
1,613,155	+				-0.4
1,613,155	+				-2.1
1,613,155	+				-1.7
1,613,156	-				-1.9
1,613,157	+				-0.5
1,613,157	+				-1.5
1,613,157	+				-1.1
1,613,158	-				-1.8
1,613,158	-				+0.7
1,613,158	-				-1.8
1,613,159	+				-1.1
1,613,159	+				-1.4
1,613,159	+				-1.8
1,613,159	+				-0.4
1,613,172	-				+0.7
1,613,180	-				+0.2
1,613,181	+				-0.4
1,613,181	+				-0.9
1,613,181	+				-1.6
1,613,183	-				+0.0
1,613,183	-				-2.2
1,613,225	+				+0.8
1,613,229	-				+0.1
1,613,251	+		MMJJ_RS08755	0.11	-1.7
1,613,251	+		MMJJ_RS08755	0.11	+2.5
1,613,287	-		MMJJ_RS08755	0.15	+0.7
1,613,287	-		MMJJ_RS08755	0.15	+2.1
1,613,287	-		MMJJ_RS08755	0.15	-0.0
1,613,287	-		MMJJ_RS08755	0.15	-0.9
1,613,288	+		MMJJ_RS08755	0.15	-0.2
1,613,288	+		MMJJ_RS08755	0.15	-0.7
1,613,288	+		MMJJ_RS08755	0.15	-1.1
1,613,288	+		MMJJ_RS08755	0.15	-0.6
1,613,298	-		MMJJ_RS08755	0.16	-0.5
1,613,301	+		MMJJ_RS08755	0.17	-0.9
1,613,301	+		MMJJ_RS08755	0.17	+0.1
1,613,302	-		MMJJ_RS08755	0.17	-0.8
1,613,302	-		MMJJ_RS08755	0.17	+0.5
1,613,303	+		MMJJ_RS08755	0.17	+0.4
1,613,337	-		MMJJ_RS08755	0.21	-5.7
1,613,338	+		MMJJ_RS08755	0.21	-1.7
1,613,352	+		MMJJ_RS08755	0.22	-0.7
1,613,352	+		MMJJ_RS08755	0.22	-1.1
1,613,393	-		MMJJ_RS08755	0.27	-1.7
1,613,394	+		MMJJ_RS08755	0.27	-1.4
1,613,394	+		MMJJ_RS08755	0.27	-0.9
1,613,421	-		MMJJ_RS08755	0.30	-1.4
1,613,422	+		MMJJ_RS08755	0.30	-1.5
1,613,449	-		MMJJ_RS08755	0.33	+0.1
1,613,450	+		MMJJ_RS08755	0.33	-0.9
1,613,554	-		MMJJ_RS08755	0.44	-0.1
1,613,555	+		MMJJ_RS08755	0.44	-0.6
1,613,555	+		MMJJ_RS08755	0.44	-0.4
1,613,555	+		MMJJ_RS08755	0.44	-0.1
1,613,580	+		MMJJ_RS08755	0.47	-0.0
1,613,584	-		MMJJ_RS08755	0.47	-0.6
1,613,626	-		MMJJ_RS08755	0.52	+1.5
1,613,626	-		MMJJ_RS08755	0.52	-3.4
1,613,627	+		MMJJ_RS08755	0.52	-0.8
1,613,627	+		MMJJ_RS08755	0.52	+0.0
1,613,670	-		MMJJ_RS08755	0.57	-0.5
1,613,670	-		MMJJ_RS08755	0.57	+0.1
1,613,670	-		MMJJ_RS08755	0.57	-0.6
1,613,670	-		MMJJ_RS08755	0.57	+0.8
1,613,671	+		MMJJ_RS08755	0.57	-4.7
1,613,671	+		MMJJ_RS08755	0.57	+0.5
1,613,693	+		MMJJ_RS08755	0.59	+0.1
1,613,693	+		MMJJ_RS08755	0.59	-1.0
1,613,781	-		MMJJ_RS08755	0.69	-0.1
1,613,782	+		MMJJ_RS08755	0.69	+0.0
1,613,793	+		MMJJ_RS08755	0.70	-0.3
1,613,793	+		MMJJ_RS08755	0.70	+0.5
1,613,804	-		MMJJ_RS08755	0.71	-1.1
1,613,805	+		MMJJ_RS08755	0.71	+0.2
1,613,835	-		MMJJ_RS08755	0.75	-0.2
1,613,836	+		MMJJ_RS08755	0.75	+0.5
1,613,836	+		MMJJ_RS08755	0.75	-1.2
1,613,836	+		MMJJ_RS08755	0.75	-1.0
1,613,868	-		MMJJ_RS08755	0.78	-3.5
1,613,869	+		MMJJ_RS08755	0.78	-0.7
1,613,869	+		MMJJ_RS08755	0.78	-1.8
1,613,869	+		MMJJ_RS08755	0.78	+0.1
1,613,869	+		MMJJ_RS08755	0.78	+0.4
1,613,869	+		MMJJ_RS08755	0.78	-0.1
1,613,872	+		MMJJ_RS08755	0.79	-0.0
1,613,872	+		MMJJ_RS08755	0.79	-0.8
1,613,874	+		MMJJ_RS08755	0.79	+0.6
1,613,891	-		MMJJ_RS08755	0.81	-1.7
1,613,910	-		MMJJ_RS08755	0.83	-0.4
1,613,910	-		MMJJ_RS08755	0.83	-1.5
1,613,911	+		MMJJ_RS08755	0.83	-0.8
1,613,911	+		MMJJ_RS08755	0.83	-0.9
1,613,913	+		MMJJ_RS08755	0.83	-1.6
1,613,925	+		MMJJ_RS08755	0.84	+0.7
1,613,995	-				+0.7
1,614,033	-				+0.1
1,614,071	-				-0.1
1,614,084	+				+0.4
1,614,112	-				+0.2
1,614,113	+				-0.3
1,614,113	+				-2.5
1,614,139	-				-0.2
1,614,140	+				-1.3
1,614,200	-		MMJJ_RS08760	0.11	-1.8
1,614,342	-		MMJJ_RS08760	0.25	-1.6
1,614,346	-		MMJJ_RS08760	0.25	-0.7
1,614,346	-		MMJJ_RS08760	0.25	+0.5
1,614,393	-		MMJJ_RS08760	0.30	-2.6
1,614,472	-		MMJJ_RS08760	0.37	-0.3
1,614,473	+		MMJJ_RS08760	0.37	-1.0
1,614,476	+		MMJJ_RS08760	0.38	+1.6
1,614,478	-		MMJJ_RS08760	0.38	+0.0
1,614,478	-		MMJJ_RS08760	0.38	-0.8
1,614,478	-		MMJJ_RS08760	0.38	+0.3
1,614,505	+		MMJJ_RS08760	0.40	-0.3
1,614,512	+		MMJJ_RS08760	0.41	-1.5
1,614,520	+		MMJJ_RS08760	0.42	-3.5
1,614,544	-		MMJJ_RS08760	0.44	-1.9
1,614,592	+		MMJJ_RS08760	0.49	-1.8
1,614,601	-		MMJJ_RS08760	0.49	-0.2
1,614,602	+		MMJJ_RS08760	0.50	-0.3
1,614,602	+		MMJJ_RS08760	0.50	-2.0
1,614,602	+		MMJJ_RS08760	0.50	-4.8
1,614,602	+		MMJJ_RS08760	0.50	-0.5
1,614,602	+		MMJJ_RS08760	0.50	+0.3
1,614,602	+		MMJJ_RS08760	0.50	-2.4
1,614,614	+		MMJJ_RS08760	0.51	+1.0
1,614,691	+		MMJJ_RS08760	0.58	-0.2
1,614,709	-		MMJJ_RS08760	0.60	-2.2
1,614,718	-		MMJJ_RS08760	0.61	-0.7
1,614,718	-		MMJJ_RS08760	0.61	-1.1
1,614,721	-		MMJJ_RS08760	0.61	-1.1
1,614,722	+		MMJJ_RS08760	0.61	-1.4
1,614,722	+		MMJJ_RS08760	0.61	-0.0
1,614,728	+		MMJJ_RS08760	0.62	-2.0
1,614,728	+		MMJJ_RS08760	0.62	-1.3
1,614,731	-		MMJJ_RS08760	0.62	-0.3
1,614,773	-		MMJJ_RS08760	0.66	-0.6
1,614,773	-		MMJJ_RS08760	0.66	-0.4
1,614,795	-		MMJJ_RS08760	0.68	-3.2
1,614,850	+		MMJJ_RS08760	0.73	-1.0
1,614,907	+		MMJJ_RS08760	0.79	+1.0
1,614,949	-		MMJJ_RS08760	0.83	-1.6
1,614,949	-		MMJJ_RS08760	0.83	-1.8
1,614,949	-		MMJJ_RS08760	0.83	-1.8
1,614,950	+		MMJJ_RS08760	0.83	-1.3
1,614,950	+		MMJJ_RS08760	0.83	-5.8
1,614,950	+		MMJJ_RS08760	0.83	-2.3
1,614,984	+		MMJJ_RS08760	0.86	-1.9
1,615,013	-		MMJJ_RS08760	0.89	-1.3
1,615,025	+		MMJJ_RS08760	0.90	+0.9
1,615,028	-				+0.3
1,615,060	-				-5.2
1,615,061	+				-0.3
1,615,099	-				+0.1
1,615,120	-				-4.1
1,615,121	+				-2.0
1,615,121	+				+0.0
1,615,124	+				-1.4
1,615,144	-				-3.4
1,615,144	-				-0.7
1,615,144	-				-2.0
1,615,145	+				-1.3
1,615,146	-				-2.9
1,615,146	-				+0.1
1,615,146	-				-2.4
1,615,147	+				-1.7
1,615,147	+				-0.9
1,615,151	-				-0.4
1,615,151	-				-3.2
1,615,151	-				-0.4
1,615,152	+				-5.5
1,615,152	+				+0.3
1,615,152	+				-1.4
1,615,154	-				-0.3
1,615,154	-				-0.4
1,615,154	-				-0.2
1,615,154	-				-0.3
1,615,154	-				-0.1
1,615,154	-				+0.4
1,615,154	-				+0.2
1,615,154	-				-1.0
1,615,154	-				-0.6
1,615,155	+				+0.9
1,615,155	+				-0.6
1,615,166	+				-3.9
1,615,178	+				-0.8
1,615,188	+				+0.1
1,615,188	+				-0.6
1,615,188	+				-2.8
1,615,218	-				-1.4
1,615,252	-				-1.5
1,615,262	+				+0.7
1,615,282	-				-2.2
1,615,283	+				-1.0
1,615,283	+				-0.8
1,615,318	-		MMJJ_RS08765	0.11	-0.2
1,615,319	+		MMJJ_RS08765	0.11	-0.5
1,615,319	+		MMJJ_RS08765	0.11	-2.9
1,615,319	+		MMJJ_RS08765	0.11	-1.6
1,615,319	+		MMJJ_RS08765	0.11	+0.5
1,615,320	-		MMJJ_RS08765	0.11	+0.3
1,615,320	-		MMJJ_RS08765	0.11	-1.1
1,615,321	+		MMJJ_RS08765	0.11	-1.8
1,615,336	-		MMJJ_RS08765	0.12	-3.6
1,615,350	-		MMJJ_RS08765	0.14	-4.7
1,615,351	+		MMJJ_RS08765	0.14	+1.0
1,615,352	-		MMJJ_RS08765	0.14	+0.1
1,615,352	-		MMJJ_RS08765	0.14	-1.7
1,615,352	-		MMJJ_RS08765	0.14	-1.1
1,615,352	-		MMJJ_RS08765	0.14	+2.1
1,615,353	+		MMJJ_RS08765	0.14	-6.4
1,615,353	+		MMJJ_RS08765	0.14	-1.8
1,615,353	+		MMJJ_RS08765	0.14	-2.0
1,615,353	+		MMJJ_RS08765	0.14	+0.4
1,615,353	+		MMJJ_RS08765	0.14	-4.4
1,615,473	-		MMJJ_RS08765	0.24	-0.6
1,615,474	+		MMJJ_RS08765	0.24	-1.4
1,615,496	+		MMJJ_RS08765	0.26	-4.2
1,615,514	+		MMJJ_RS08765	0.28	-0.5
1,615,536	-		MMJJ_RS08765	0.30	-5.3
1,615,541	+		MMJJ_RS08765	0.30	-0.2
1,615,546	+		MMJJ_RS08765	0.31	-0.1
1,615,567	-		MMJJ_RS08765	0.33	-1.4
1,615,568	+		MMJJ_RS08765	0.33	-3.4
1,615,568	+		MMJJ_RS08765	0.33	-0.4
1,615,568	+		MMJJ_RS08765	0.33	-0.6
1,615,568	+		MMJJ_RS08765	0.33	-1.5
1,615,574	+		MMJJ_RS08765	0.33	-3.3
1,615,584	-		MMJJ_RS08765	0.34	-1.5
1,615,584	-		MMJJ_RS08765	0.34	-1.4
1,615,585	+		MMJJ_RS08765	0.34	-4.4
1,615,588	-		MMJJ_RS08765	0.34	-0.4
1,615,589	+		MMJJ_RS08765	0.34	+0.6
1,615,589	+		MMJJ_RS08765	0.34	-4.3
1,615,589	+		MMJJ_RS08765	0.34	-0.7
1,615,591	-		MMJJ_RS08765	0.35	+1.7
1,615,591	-		MMJJ_RS08765	0.35	-1.3
1,615,592	+		MMJJ_RS08765	0.35	-2.8
1,615,593	-		MMJJ_RS08765	0.35	+0.3
1,615,593	-		MMJJ_RS08765	0.35	+1.1
1,615,593	-		MMJJ_RS08765	0.35	+0.1
1,615,594	+		MMJJ_RS08765	0.35	-0.8
1,615,594	+		MMJJ_RS08765	0.35	-3.3
1,615,594	+		MMJJ_RS08765	0.35	-1.9
1,615,594	+		MMJJ_RS08765	0.35	-2.4
1,615,594	+		MMJJ_RS08765	0.35	-2.2
1,615,619	+		MMJJ_RS08765	0.37	-2.4
1,615,625	-		MMJJ_RS08765	0.38	-2.0
1,615,625	-		MMJJ_RS08765	0.38	-2.3
1,615,626	+		MMJJ_RS08765	0.38	-0.3
1,615,626	+		MMJJ_RS08765	0.38	-3.4
1,615,626	+		MMJJ_RS08765	0.38	-3.3
1,615,626	+		MMJJ_RS08765	0.38	-4.3
1,615,626	+		MMJJ_RS08765	0.38	-0.7
1,615,626	+		MMJJ_RS08765	0.38	-3.6
1,615,734	-		MMJJ_RS08765	0.47	-4.1
1,615,748	-		MMJJ_RS08765	0.48	-1.4
1,615,756	-		MMJJ_RS08765	0.49	-4.9
1,615,759	-		MMJJ_RS08765	0.49	-3.8
1,615,759	-		MMJJ_RS08765	0.49	-1.2
1,615,762	-		MMJJ_RS08765	0.49	+1.1
1,615,762	-		MMJJ_RS08765	0.49	+1.0
1,615,764	-		MMJJ_RS08765	0.50	-4.2
1,615,765	+		MMJJ_RS08765	0.50	-4.6
1,615,765	+		MMJJ_RS08765	0.50	-1.0
1,615,792	+		MMJJ_RS08765	0.52	-1.4
1,615,793	-		MMJJ_RS08765	0.52	-3.9
1,615,793	-		MMJJ_RS08765	0.52	+0.4
1,615,793	-		MMJJ_RS08765	0.52	+0.1
1,615,794	+		MMJJ_RS08765	0.52	-4.3
1,615,846	-		MMJJ_RS08765	0.57	-0.5
1,615,847	+		MMJJ_RS08765	0.57	-1.9
1,615,912	+		MMJJ_RS08765	0.62	-1.6
1,615,964	+		MMJJ_RS08765	0.67	-0.6
1,615,975	-		MMJJ_RS08765	0.68	-4.7
1,615,976	+		MMJJ_RS08765	0.68	-0.3
1,615,976	+		MMJJ_RS08765	0.68	-4.0
1,615,995	-		MMJJ_RS08765	0.70	-4.0
1,615,995	-		MMJJ_RS08765	0.70	-0.0
1,615,996	+		MMJJ_RS08765	0.70	-0.8
1,616,001	-		MMJJ_RS08765	0.70	-0.7
1,616,002	+		MMJJ_RS08765	0.70	-5.1
1,616,006	+		MMJJ_RS08765	0.71	-4.6
1,616,114	+		MMJJ_RS08765	0.80	-2.6
1,616,123	+		MMJJ_RS08765	0.81	-0.9
1,616,128	+		MMJJ_RS08765	0.81	-0.1
1,616,128	+		MMJJ_RS08765	0.81	+0.4
1,616,128	+		MMJJ_RS08765	0.81	-4.2