Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05965

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,109,018	+				-0.8
1,109,018	+				+0.5
1,109,019	-				+2.6
1,109,027	+				-0.8
1,109,035	-				+0.2
1,109,035	-				-1.1
1,109,035	-				+0.1
1,109,077	-				+0.3
1,109,111	-				-2.7
1,109,112	+				-2.1
1,109,112	+				-0.8
1,109,112	+				+0.2
1,109,115	-				+0.5
1,109,115	-				-0.4
1,109,145	-				+1.0
1,109,145	-				+1.2
1,109,145	-				+1.2
1,109,145	-				+0.6
1,109,145	-				+0.2
1,109,145	-				+0.9
1,109,147	-				+0.7
1,109,147	-				+1.3
1,109,148	+				-1.2
1,109,148	+				+0.5
1,109,148	+				-0.3
1,109,148	+				+0.1
1,109,150	-				-2.6
1,109,150	-				-0.1
1,109,150	-				+0.7
1,109,150	-				+0.5
1,109,150	-				+0.7
1,109,151	+				-0.4
1,109,151	+				+1.1
1,109,151	+				+0.2
1,109,151	+				-0.2
1,109,151	+				+0.5
1,109,153	-				+0.0
1,109,153	-				+1.1
1,109,153	-				-4.2
1,109,153	-				-0.8
1,109,153	-				+0.4
1,109,153	-				-0.6
1,109,153	-				-0.1
1,109,153	-				-1.9
1,109,153	-				+0.2
1,109,153	-				-2.8
1,109,153	-				-0.2
1,109,153	-				-0.6
1,109,154	+				-0.3
1,109,154	+				+0.1
1,109,154	+				-2.4
1,109,154	+				+0.5
1,109,154	+				-0.5
1,109,154	+				+0.3
1,109,154	+				-0.5
1,109,154	+				+1.1
1,109,155	-				-0.0
1,109,155	-				+0.3
1,109,155	-				+0.2
1,109,155	-				-0.8
1,109,155	-				+0.0
1,109,155	-				-0.3
1,109,156	+				-1.7
1,109,156	+				+0.4
1,109,156	+				-0.6
1,109,156	+				+0.9
1,109,156	+				+0.2
1,109,156	+				-0.8
1,109,156	+				-0.3
1,109,157	-				-2.1
1,109,157	-				-0.2
1,109,157	-				+0.8
1,109,157	-				+1.3
1,109,157	-				+0.1
1,109,157	-				+0.9
1,109,157	-				+0.7
1,109,157	-				-0.6
1,109,157	-				+0.7
1,109,157	-				-4.7
1,109,157	-				+0.5
1,109,157	-				+0.9
1,109,157	-				+0.9
1,109,158	+				+0.5
1,109,158	+				-0.6
1,109,158	+				+0.3
1,109,158	+				-1.0
1,109,158	+				-0.1
1,109,158	+				-3.9
1,109,161	-				+0.0
1,109,161	-				+0.0
1,109,161	-				-0.2
1,109,161	-				-3.3
1,109,168	-				+1.1
1,109,178	-				-0.5
1,109,178	-				-1.7
1,109,179	+				-0.1
1,109,185	+				+0.4
1,109,203	-				+0.1
1,109,203	-				+0.4
1,109,205	-				-0.2
1,109,205	-				+0.2
1,109,206	+				-0.4
1,109,206	+				+0.0
1,109,208	+				-2.0
1,109,253	-				+1.2
1,109,253	-				-1.2
1,109,253	-				-1.7
1,109,254	+				-0.9
1,109,254	+				+0.8
1,109,254	+				+0.1
1,109,267	-				+0.1
1,109,267	-				+0.2
1,109,268	+				+1.8
1,109,269	-				-5.1
1,109,269	-				+0.8
1,109,269	-				-0.9
1,109,269	-				-0.0
1,109,269	-				+0.4
1,109,269	-				-1.8
1,109,269	-				-0.7
1,109,269	-				-1.7
1,109,269	-				+1.0
1,109,269	-				-0.4
1,109,269	-				-0.6
1,109,270	+				-1.9
1,109,270	+				-0.0
1,109,270	+				+1.7
1,109,270	+				+0.4
1,109,270	+				-0.0
1,109,270	+				+0.1
1,109,270	+				+0.8
1,109,270	+				+0.7
1,109,349	-		MMJJ_RS05960	0.11	-0.5
1,109,350	+		MMJJ_RS05960	0.11	-0.3
1,109,358	+		MMJJ_RS05960	0.12	+1.1
1,109,484	-		MMJJ_RS05960	0.31	+0.1
1,109,484	-		MMJJ_RS05960	0.31	-2.6
1,109,484	-		MMJJ_RS05960	0.31	+1.2
1,109,484	-		MMJJ_RS05960	0.31	-0.6
1,109,484	-		MMJJ_RS05960	0.31	+0.6
1,109,484	-		MMJJ_RS05960	0.31	+1.3
1,109,484	-		MMJJ_RS05960	0.31	+1.4
1,109,562	+		MMJJ_RS05960	0.42	+0.1
1,109,562	+		MMJJ_RS05960	0.42	+0.2
1,109,592	-		MMJJ_RS05960	0.46	+0.7
1,109,633	+		MMJJ_RS05960	0.52	+0.7
1,109,655	+		MMJJ_RS05960	0.55	-2.4
1,109,688	+		MMJJ_RS05960	0.60	+0.1
1,109,693	-		MMJJ_RS05960	0.61	-0.4
1,109,694	+		MMJJ_RS05960	0.61	-0.2
1,109,694	+		MMJJ_RS05960	0.61	+0.5
1,109,694	+		MMJJ_RS05960	0.61	+0.3
1,109,697	+		MMJJ_RS05960	0.61	+0.5
1,109,714	-		MMJJ_RS05960	0.64	+1.9
1,109,721	-		MMJJ_RS05960	0.65	-3.7
1,109,733	-		MMJJ_RS05960	0.67	-0.8
1,109,733	-		MMJJ_RS05960	0.67	-0.2
1,109,734	+		MMJJ_RS05960	0.67	-0.5
1,109,734	+		MMJJ_RS05960	0.67	+1.2
1,109,825	-		MMJJ_RS05960	0.80	+0.4
1,109,825	-		MMJJ_RS05960	0.80	-0.1
1,109,826	+		MMJJ_RS05960	0.80	-2.7
1,109,871	-		MMJJ_RS05960	0.86	-0.8
1,109,871	-		MMJJ_RS05960	0.86	-0.2
1,109,874	-		MMJJ_RS05960	0.87	+0.3
1,109,874	-		MMJJ_RS05960	0.87	-1.5
1,109,875	+		MMJJ_RS05960	0.87	+0.3
1,109,875	+		MMJJ_RS05960	0.87	+0.7
1,109,924	-				+0.0
1,109,925	+				+0.0
1,109,941	-				+0.8
1,109,941	-				+0.7
1,110,026	-				+0.4
1,110,050	+				-0.9
1,110,131	-		MMJJ_RS05965	0.11	-0.1
1,110,131	-		MMJJ_RS05965	0.11	+0.5
1,110,173	-		MMJJ_RS05965	0.14	+0.0
1,110,284	-		MMJJ_RS05965	0.23	-0.1
1,110,291	+		MMJJ_RS05965	0.23	+1.8
1,110,303	-		MMJJ_RS05965	0.24	+0.2
1,110,304	+		MMJJ_RS05965	0.24	+0.3
1,110,308	+		MMJJ_RS05965	0.24	-0.2
1,110,308	+		MMJJ_RS05965	0.24	+0.3
1,110,314	+		MMJJ_RS05965	0.25	+0.4
1,110,317	-		MMJJ_RS05965	0.25	+0.3
1,110,322	-		MMJJ_RS05965	0.25	-3.2
1,110,323	+		MMJJ_RS05965	0.25	+1.2
1,110,323	+		MMJJ_RS05965	0.25	-1.5
1,110,323	+		MMJJ_RS05965	0.25	-0.4
1,110,325	-		MMJJ_RS05965	0.26	-0.2
1,110,336	+		MMJJ_RS05965	0.26	+0.5
1,110,355	-		MMJJ_RS05965	0.28	+0.0
1,110,356	+		MMJJ_RS05965	0.28	+0.5
1,110,378	+		MMJJ_RS05965	0.29	-2.6
1,110,438	+		MMJJ_RS05965	0.34	+0.2
1,110,452	-		MMJJ_RS05965	0.35	-0.0
1,110,453	+		MMJJ_RS05965	0.35	+0.7
1,110,531	-		MMJJ_RS05965	0.41	+0.3
1,110,531	-		MMJJ_RS05965	0.41	-0.6
1,110,531	-		MMJJ_RS05965	0.41	+0.5
1,110,532	+		MMJJ_RS05965	0.41	+0.1
1,110,543	-		MMJJ_RS05965	0.41	+0.6
1,110,548	-		MMJJ_RS05965	0.42	-0.0
1,110,628	-		MMJJ_RS05965	0.48	-0.5
1,110,629	+		MMJJ_RS05965	0.48	-0.6
1,110,644	+		MMJJ_RS05965	0.49	+0.3
1,110,647	-		MMJJ_RS05965	0.49	+0.4
1,110,648	+		MMJJ_RS05965	0.49	+0.4
1,110,648	+		MMJJ_RS05965	0.49	+0.8
1,110,648	+		MMJJ_RS05965	0.49	+1.0
1,110,649	-		MMJJ_RS05965	0.49	+0.1
1,110,650	+		MMJJ_RS05965	0.49	+0.6
1,110,650	+		MMJJ_RS05965	0.49	+0.8
1,110,703	-		MMJJ_RS05965	0.53	-0.0
1,110,717	+		MMJJ_RS05965	0.54	+0.8
1,110,725	-		MMJJ_RS05965	0.55	+0.4
1,110,741	-		MMJJ_RS05965	0.56	-0.1
1,110,742	+		MMJJ_RS05965	0.56	-2.0
1,110,822	-		MMJJ_RS05965	0.62	+0.6
1,110,822	-		MMJJ_RS05965	0.62	-2.8
1,110,822	-		MMJJ_RS05965	0.62	-0.2
1,110,823	+		MMJJ_RS05965	0.62	-0.3
1,110,823	+		MMJJ_RS05965	0.62	+0.0
1,110,823	+		MMJJ_RS05965	0.62	+1.6
1,110,823	+		MMJJ_RS05965	0.62	-0.3
1,110,823	+		MMJJ_RS05965	0.62	-0.6
1,110,827	-		MMJJ_RS05965	0.62	+0.3
1,110,857	-		MMJJ_RS05965	0.64	-0.3
1,110,858	+		MMJJ_RS05965	0.64	-1.2
1,110,858	+		MMJJ_RS05965	0.64	+0.3
1,110,859	-		MMJJ_RS05965	0.64	-0.6
1,110,860	+		MMJJ_RS05965	0.65	+0.6
1,110,877	+		MMJJ_RS05965	0.66	+0.8
1,110,914	+		MMJJ_RS05965	0.68	+0.1
1,110,914	+		MMJJ_RS05965	0.68	-0.4
1,110,924	-		MMJJ_RS05965	0.69	-0.2
1,110,924	-		MMJJ_RS05965	0.69	+0.9
1,110,925	+		MMJJ_RS05965	0.69	+0.4
1,110,925	+		MMJJ_RS05965	0.69	+1.9
1,110,925	+		MMJJ_RS05965	0.69	-1.1
1,110,940	-		MMJJ_RS05965	0.70	-2.1
1,110,940	-		MMJJ_RS05965	0.70	+0.3
1,110,976	+		MMJJ_RS05965	0.73	+0.1
1,110,986	-		MMJJ_RS05965	0.74	-0.4
1,110,990	+		MMJJ_RS05965	0.74	-1.2
1,111,011	+		MMJJ_RS05965	0.76	-0.1
1,111,011	+		MMJJ_RS05965	0.76	+0.6
1,111,021	-		MMJJ_RS05965	0.76	-0.7
1,111,025	-		MMJJ_RS05965	0.77	+0.6
1,111,025	-		MMJJ_RS05965	0.77	+0.3
1,111,037	-		MMJJ_RS05965	0.77	+0.5
1,111,038	+		MMJJ_RS05965	0.78	+0.7
1,111,047	+		MMJJ_RS05965	0.78	-0.4
1,111,094	-		MMJJ_RS05965	0.82	+0.7
1,111,141	-		MMJJ_RS05965	0.85	+1.6
1,111,141	-		MMJJ_RS05965	0.85	+0.2
1,111,144	-		MMJJ_RS05965	0.85	-2.2
1,111,145	+		MMJJ_RS05965	0.85	-2.7
1,111,170	+		MMJJ_RS05965	0.87	+0.4
1,111,190	-		MMJJ_RS05965	0.89	+0.5
1,111,190	-		MMJJ_RS05965	0.89	-0.7
1,111,203	+		MMJJ_RS05965	0.90	-0.2
1,111,214	-				+0.9
1,111,214	-				+0.5
1,111,250	+				-0.1
1,111,359	-				-0.9
1,111,359	-				-0.2
1,111,360	+				+0.9
1,111,360	+				-0.4
1,111,360	+				+0.9
1,111,361	-				+0.6
1,111,361	-				+0.1
1,111,361	-				+0.3
1,111,361	-				+0.3
1,111,361	-				-2.9
1,111,361	-				+0.5
1,111,361	-				+0.1
1,111,361	-				-0.3
1,111,362	+				-0.3
1,111,362	+				+0.1
1,111,362	+				+1.4
1,111,362	+				+0.5
1,111,362	+				-1.9
1,111,362	+				-4.4
1,111,362	+				+1.0
1,111,362	+				-0.3
1,111,363	-				+2.7
1,111,363	-				-0.3
1,111,364	+				-2.7
1,111,364	+				+0.4
1,111,364	+				-0.3
1,111,364	+				+0.2
1,111,371	-				+0.1
1,111,371	-				+0.9
1,111,377	-				-2.3
1,111,385	+				-1.1
1,111,388	-				+0.1
1,111,388	-				-0.0
1,111,419	-				-0.4
1,111,436	-				+0.3
1,111,436	-				+0.3
1,111,437	+				+0.4
1,111,437	+				+0.7
1,111,440	-				+0.7
1,111,440	-				-1.6
1,111,440	-				+0.4
1,111,440	-				+0.8
1,111,441	+				+1.1
1,111,441	+				-0.4
1,111,441	+				-0.3
1,111,441	+				-1.4
1,111,441	+				-1.4
1,111,441	+				-0.3
1,111,441	+				-0.6
1,111,481	-		MMJJ_RS05970	0.25	+1.2
1,111,524	+		MMJJ_RS05970	0.43	+0.2
1,111,524	+		MMJJ_RS05970	0.43	+0.2
1,111,527	-		MMJJ_RS05970	0.44	+0.3
1,111,527	-		MMJJ_RS05970	0.44	-0.8
1,111,528	+		MMJJ_RS05970	0.44	+0.1
1,111,640	-				-0.2
1,111,687	-				+0.2
1,111,688	+				-0.9
1,111,741	+				-0.8
1,111,764	-				-1.3
1,111,772	+				-2.9
1,111,780	-				+1.2
1,111,790	+				+0.2
1,111,796	+				+0.4
1,111,928	-		MMJJ_RS05975	0.19	+0.8
1,111,982	-		MMJJ_RS05975	0.25	-2.0
1,112,111	-		MMJJ_RS05975	0.41	-0.8
1,112,112	+		MMJJ_RS05975	0.41	+0.8
1,112,143	-		MMJJ_RS05975	0.45	-0.3
1,112,143	-		MMJJ_RS05975	0.45	+0.7
1,112,143	-		MMJJ_RS05975	0.45	+0.8
1,112,144	+		MMJJ_RS05975	0.45	-0.2
1,112,144	+		MMJJ_RS05975	0.45	-2.0
1,112,144	+		MMJJ_RS05975	0.45	-0.0
1,112,176	+		MMJJ_RS05975	0.49	-0.2
1,112,189	-		MMJJ_RS05975	0.51	+0.6
1,112,243	+		MMJJ_RS05975	0.57	-1.1
1,112,243	+		MMJJ_RS05975	0.57	-2.1
1,112,243	+		MMJJ_RS05975	0.57	-1.0
1,112,246	-		MMJJ_RS05975	0.58	+0.7
1,112,246	-		MMJJ_RS05975	0.58	+0.1
1,112,246	-		MMJJ_RS05975	0.58	-0.5
1,112,247	+		MMJJ_RS05975	0.58	+0.3
1,112,247	+		MMJJ_RS05975	0.58	+0.5
1,112,247	+		MMJJ_RS05975	0.58	+0.8
1,112,286	-		MMJJ_RS05975	0.62	+0.7
1,112,287	+		MMJJ_RS05975	0.63	-0.6
1,112,340	+		MMJJ_RS05975	0.69	+0.1