Experiment: 7H9 with Dodecyl Sulfate 0.02 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0822c and Rv0823c are separated by 165 nucleotides Rv0823c and Rv0824c are separated by 87 nucleotides
Rv0822c: Rv0822c - Conserved protein, at 914,257 to 916,311
Rv0822c
Rv0823c: Rv0823c - Possible transcriptional regulatory protein, at 916,477 to 917,646
Rv0823c
Rv0824c: Rv0824c - Probable acyl-[acyl-carrier protein] desaturase DesA1 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase) (protein Des), at 917,734 to 918,750
Rv0824c
Position (kb) 916
917
918 Strain fitness (log2 ratio) -1
0
1
2
3 at 915.697 kb on + strand, within Rv0822c at 915.697 kb on + strand, within Rv0822c at 915.698 kb on - strand, within Rv0822c at 915.947 kb on + strand, within Rv0822c at 915.948 kb on - strand, within Rv0822c at 915.948 kb on - strand, within Rv0822c at 916.153 kb on - strand at 916.316 kb on + strand at 916.316 kb on + strand at 916.334 kb on + strand at 916.335 kb on - strand at 916.335 kb on - strand at 916.719 kb on - strand, within Rv0823c at 916.876 kb on + strand, within Rv0823c at 916.876 kb on + strand, within Rv0823c at 916.964 kb on + strand, within Rv0823c at 916.964 kb on + strand, within Rv0823c at 916.964 kb on + strand, within Rv0823c at 916.964 kb on + strand, within Rv0823c at 916.965 kb on - strand, within Rv0823c at 916.965 kb on - strand, within Rv0823c at 916.965 kb on - strand, within Rv0823c at 916.965 kb on - strand, within Rv0823c at 916.965 kb on - strand, within Rv0823c at 917.049 kb on - strand, within Rv0823c at 917.049 kb on - strand, within Rv0823c at 917.064 kb on + strand, within Rv0823c at 917.177 kb on - strand, within Rv0823c at 917.178 kb on + strand, within Rv0823c at 917.179 kb on - strand, within Rv0823c at 917.179 kb on - strand, within Rv0823c at 917.228 kb on - strand, within Rv0823c at 917.318 kb on - strand, within Rv0823c at 917.351 kb on + strand, within Rv0823c at 917.351 kb on + strand, within Rv0823c at 917.351 kb on + strand, within Rv0823c at 917.351 kb on + strand, within Rv0823c at 917.352 kb on - strand, within Rv0823c at 917.352 kb on - strand, within Rv0823c at 917.352 kb on - strand, within Rv0823c at 917.352 kb on - strand, within Rv0823c at 917.375 kb on + strand, within Rv0823c at 917.375 kb on + strand, within Rv0823c at 917.376 kb on - strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.480 kb on + strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c at 917.481 kb on - strand, within Rv0823c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Dodecyl Sulfate 0.02 vol% remove 915,697 + Rv0822c 0.70 -0.4 915,697 + Rv0822c 0.70 -0.7 915,698 - Rv0822c 0.70 -0.6 915,947 + Rv0822c 0.82 -0.3 915,948 - Rv0822c 0.82 +0.2 915,948 - Rv0822c 0.82 +0.1 916,153 - -0.2 916,316 + -0.1 916,316 + -0.1 916,334 + -0.6 916,335 - +0.2 916,335 - -0.1 916,719 - Rv0823c 0.21 +0.5 916,876 + Rv0823c 0.34 +0.2 916,876 + Rv0823c 0.34 +0.3 916,964 + Rv0823c 0.42 +0.1 916,964 + Rv0823c 0.42 +0.4 916,964 + Rv0823c 0.42 +0.1 916,964 + Rv0823c 0.42 +1.7 916,965 - Rv0823c 0.42 -0.2 916,965 - Rv0823c 0.42 +1.0 916,965 - Rv0823c 0.42 +0.1 916,965 - Rv0823c 0.42 -1.7 916,965 - Rv0823c 0.42 +1.7 917,049 - Rv0823c 0.49 +1.1 917,049 - Rv0823c 0.49 +0.0 917,064 + Rv0823c 0.50 -0.8 917,177 - Rv0823c 0.60 +0.3 917,178 + Rv0823c 0.60 -0.6 917,179 - Rv0823c 0.60 -0.0 917,179 - Rv0823c 0.60 +0.3 917,228 - Rv0823c 0.64 +0.4 917,318 - Rv0823c 0.72 +0.1 917,351 + Rv0823c 0.75 +0.8 917,351 + Rv0823c 0.75 +1.6 917,351 + Rv0823c 0.75 -0.2 917,351 + Rv0823c 0.75 +1.3 917,352 - Rv0823c 0.75 +0.2 917,352 - Rv0823c 0.75 +0.2 917,352 - Rv0823c 0.75 -0.5 917,352 - Rv0823c 0.75 -0.4 917,375 + Rv0823c 0.77 -0.9 917,375 + Rv0823c 0.77 -1.4 917,376 - Rv0823c 0.77 -0.4 917,480 + Rv0823c 0.86 -0.2 917,480 + Rv0823c 0.86 -0.6 917,480 + Rv0823c 0.86 +0.7 917,480 + Rv0823c 0.86 -0.2 917,480 + Rv0823c 0.86 +0.1 917,480 + Rv0823c 0.86 -1.1 917,481 - Rv0823c 0.86 +3.0 917,481 - Rv0823c 0.86 +2.2 917,481 - Rv0823c 0.86 +0.0 917,481 - Rv0823c 0.86 +0.4 917,481 - Rv0823c 0.86 -0.0 917,481 - Rv0823c 0.86 +0.1 917,481 - Rv0823c 0.86 -0.3 917,481 - Rv0823c 0.86 -0.3
Or see this region's nucleotide sequence