Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS09380

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,712,229	-				-0.4
1,712,230	+				-1.6
1,712,259	-				+0.4
1,712,260	+				+0.5
1,712,260	+				+1.1
1,712,260	+				+0.5
1,712,329	-		MMJJ_RS09235	0.16	-0.4
1,712,408	+		MMJJ_RS09235	0.56	+0.2
1,712,409	-		MMJJ_RS09235	0.56	+0.1
1,712,471	-		MMJJ_RS09235	0.87	+0.6
1,712,472	+		MMJJ_RS09235	0.88	-0.2
1,712,536	-				-0.9
1,712,537	+				-0.2
1,712,623	+				-0.0
1,712,623	+				-0.0
1,712,637	-				-0.3
1,712,638	+				+0.8
1,712,654	-				+0.6
1,712,716	-		MMJJ_RS09240	0.16	+0.3
1,712,717	+		MMJJ_RS09240	0.17	-0.1
1,712,717	+		MMJJ_RS09240	0.17	-0.9
1,712,720	+		MMJJ_RS09240	0.17	-4.0
1,712,753	-		MMJJ_RS09240	0.24	+0.5
1,712,755	-		MMJJ_RS09240	0.24	+0.5
1,712,755	-		MMJJ_RS09240	0.24	+0.5
1,712,755	-		MMJJ_RS09240	0.24	-0.6
1,712,755	-		MMJJ_RS09240	0.24	-0.1
1,712,755	-		MMJJ_RS09240	0.24	+0.3
1,712,755	-		MMJJ_RS09240	0.24	+0.3
1,712,755	-		MMJJ_RS09240	0.24	+0.5
1,712,755	-		MMJJ_RS09240	0.24	+0.5
1,712,755	-		MMJJ_RS09240	0.24	-0.8
1,712,755	-		MMJJ_RS09240	0.24	+0.3
1,712,755	-		MMJJ_RS09240	0.24	+1.4
1,712,755	-		MMJJ_RS09240	0.24	-0.1
1,712,755	-		MMJJ_RS09240	0.24	-0.3
1,712,756	+		MMJJ_RS09240	0.24	+0.7
1,712,756	+		MMJJ_RS09240	0.24	+0.7
1,712,756	+		MMJJ_RS09240	0.24	+1.5
1,712,756	+		MMJJ_RS09240	0.24	-1.5
1,712,756	+		MMJJ_RS09240	0.24	+0.6
1,712,756	+		MMJJ_RS09240	0.24	-0.7
1,712,756	+		MMJJ_RS09240	0.24	-0.8
1,712,756	+		MMJJ_RS09240	0.24	+0.3
1,712,756	+		MMJJ_RS09240	0.24	-4.5
1,712,756	+		MMJJ_RS09240	0.24	+0.1
1,712,756	+		MMJJ_RS09240	0.24	+0.7
1,712,757	-		MMJJ_RS09240	0.24	-0.2
1,712,757	-		MMJJ_RS09240	0.24	+1.3
1,712,757	-		MMJJ_RS09240	0.24	-5.0
1,712,757	-		MMJJ_RS09240	0.24	+0.5
1,712,757	-		MMJJ_RS09240	0.24	-1.3
1,712,757	-		MMJJ_RS09240	0.24	+0.3
1,712,757	-		MMJJ_RS09240	0.24	-0.3
1,712,757	-		MMJJ_RS09240	0.24	+0.7
1,712,757	-		MMJJ_RS09240	0.24	+1.2
1,712,757	-		MMJJ_RS09240	0.24	+0.2
1,712,757	-		MMJJ_RS09240	0.24	-0.2
1,712,757	-		MMJJ_RS09240	0.24	+0.9
1,712,757	-		MMJJ_RS09240	0.24	-2.3
1,712,757	-		MMJJ_RS09240	0.24	+0.1
1,712,757	-		MMJJ_RS09240	0.24	+1.8
1,712,757	-		MMJJ_RS09240	0.24	-0.8
1,712,757	-		MMJJ_RS09240	0.24	-0.1
1,712,757	-		MMJJ_RS09240	0.24	-0.0
1,712,757	-		MMJJ_RS09240	0.24	-0.1
1,712,757	-		MMJJ_RS09240	0.24	-0.5
1,712,757	-		MMJJ_RS09240	0.24	-0.5
1,712,757	-		MMJJ_RS09240	0.24	+0.5
1,712,758	+		MMJJ_RS09240	0.25	+0.4
1,712,758	+		MMJJ_RS09240	0.25	+1.1
1,712,758	+		MMJJ_RS09240	0.25	-0.1
1,712,758	+		MMJJ_RS09240	0.25	+0.0
1,712,758	+		MMJJ_RS09240	0.25	-0.6
1,712,758	+		MMJJ_RS09240	0.25	-0.2
1,712,758	+		MMJJ_RS09240	0.25	+1.0
1,712,758	+		MMJJ_RS09240	0.25	+1.0
1,712,758	+		MMJJ_RS09240	0.25	+0.4
1,712,758	+		MMJJ_RS09240	0.25	-0.1
1,712,758	+		MMJJ_RS09240	0.25	-0.8
1,712,758	+		MMJJ_RS09240	0.25	+0.2
1,712,758	+		MMJJ_RS09240	0.25	-0.6
1,712,758	+		MMJJ_RS09240	0.25	-0.2
1,712,758	+		MMJJ_RS09240	0.25	+0.3
1,712,758	+		MMJJ_RS09240	0.25	+0.3
1,712,758	+		MMJJ_RS09240	0.25	+0.3
1,712,758	+		MMJJ_RS09240	0.25	-0.3
1,712,758	+		MMJJ_RS09240	0.25	-0.0
1,712,759	-		MMJJ_RS09240	0.25	-0.5
1,712,759	-		MMJJ_RS09240	0.25	+1.1
1,712,759	-		MMJJ_RS09240	0.25	+0.2
1,712,759	-		MMJJ_RS09240	0.25	+0.5
1,712,759	-		MMJJ_RS09240	0.25	+1.1
1,712,759	-		MMJJ_RS09240	0.25	-0.7
1,712,759	-		MMJJ_RS09240	0.25	+0.5
1,712,759	-		MMJJ_RS09240	0.25	-1.0
1,712,759	-		MMJJ_RS09240	0.25	-0.2
1,712,759	-				-1.3
1,712,759	-		MMJJ_RS09240	0.25	-0.3
1,712,760	+		MMJJ_RS09240	0.25	-0.1
1,712,760	+		MMJJ_RS09240	0.25	+0.7
1,712,760	+		MMJJ_RS09240	0.25	-0.1
1,712,760	+		MMJJ_RS09240	0.25	+0.3
1,712,760	+		MMJJ_RS09240	0.25	-0.2
1,712,760	+		MMJJ_RS09240	0.25	+0.9
1,712,760	+		MMJJ_RS09240	0.25	-0.4
1,712,760	+		MMJJ_RS09240	0.25	-1.4
1,712,760	+		MMJJ_RS09240	0.25	-0.1
1,712,763	-		MMJJ_RS09240	0.25	-0.0
1,712,763	-		MMJJ_RS09240	0.25	-1.4
1,712,764	+		MMJJ_RS09240	0.26	+0.8
1,712,764	+		MMJJ_RS09240	0.26	+0.8
1,712,764	+		MMJJ_RS09240	0.26	-0.3
1,712,764	+		MMJJ_RS09240	0.26	-3.3
1,712,764	+		MMJJ_RS09240	0.26	-0.7
1,712,781	+		MMJJ_RS09240	0.29	+0.0
1,712,782	-		MMJJ_RS09240	0.29	+0.2
1,712,838	-		MMJJ_RS09240	0.40	+1.9
1,712,867	-		MMJJ_RS09240	0.45	-1.4
1,712,868	+		MMJJ_RS09240	0.46	-1.3
1,712,868	+		MMJJ_RS09240	0.46	-0.1
1,712,908	-		MMJJ_RS09240	0.53	-1.4
1,712,909	+		MMJJ_RS09240	0.53	+0.5
1,712,909	+		MMJJ_RS09240	0.53	-1.4
1,712,911	-		MMJJ_RS09240	0.54	-0.1
1,712,912	+		MMJJ_RS09240	0.54	+0.9
1,712,916	+		MMJJ_RS09240	0.55	+0.2
1,712,916	+		MMJJ_RS09240	0.55	-0.0
1,713,035	-		MMJJ_RS09240	0.78	+0.1
1,713,056	-		MMJJ_RS09240	0.82	+1.4
1,713,056	-		MMJJ_RS09240	0.82	+0.2
1,713,056	-		MMJJ_RS09240	0.82	+0.2
1,713,056	-		MMJJ_RS09240	0.82	+0.0
1,713,057	+		MMJJ_RS09240	0.82	-0.7
1,713,078	+				-1.0
1,713,082	-		MMJJ_RS09240	0.87	+0.5
1,713,083	+		MMJJ_RS09240	0.87	+1.0
1,713,086	-		MMJJ_RS09240	0.87	+1.2
1,713,087	+		MMJJ_RS09240	0.88	+0.9
1,713,093	-		MMJJ_RS09240	0.89	+0.3
1,713,094	+				+2.6
1,713,094	+		MMJJ_RS09240	0.89	+0.0
1,713,097	+		MMJJ_RS09240	0.89	+0.4
1,713,097	+		MMJJ_RS09240	0.89	+0.8
1,713,135	+				-1.9
1,713,172	+				+0.5
1,713,206	-		MMJJ_RS09380	0.15	+0.1
1,713,293	-		MMJJ_RS09380	0.70	+1.2
1,713,296	+		MMJJ_RS09380	0.72	-1.0
1,713,315	+		MMJJ_RS09380	0.84	+0.9
1,713,327	-				+0.2
1,713,327	-				+0.5
1,713,327	-				+0.1
1,713,335	+				-0.0
1,713,335	+				+0.6
1,713,354	-				+0.1
1,713,359	-				+0.5
1,713,359	-				+0.1
1,713,371	-				-0.2
1,713,373	-				+0.8
1,713,399	-				+0.3
1,713,400	+				-0.5
1,713,403	-				+0.4
1,713,404	+				-0.4
1,713,406	+				+0.2
1,713,406	+				-0.0
1,713,414	-				+0.0
1,713,440	+				+0.3
1,713,443	+				+0.0
1,713,446	-				+0.4
1,713,447	+				-0.5
1,713,467	+				-0.1
1,713,472	-				+1.6
1,713,476	-				+0.5
1,713,476	-				-0.7
1,713,476	-				-1.1
1,713,476	-				-4.6
1,713,477	+				-5.6
1,713,477	+				-0.9
1,713,477	+				+1.0
1,713,477	+				-0.3
1,713,479	-				-0.3
1,713,479	-				+1.3
1,713,479	-				+0.4
1,713,480	+				+0.3
1,713,480	+				+0.7
1,713,511	-				+0.7
1,713,604	-				-0.3
1,713,604	-				+0.6
1,713,604	-				+0.4
1,713,632	-				+0.5
1,713,633	+				-1.7
1,713,633	+				-0.0
1,713,645	-				+0.7
1,713,645	-				-3.1
1,713,645	-				-0.9
1,713,646	+				+0.7
1,713,646	+				+0.9
1,713,652	+				+0.6
1,713,654	+				+1.6
1,713,654	+				+0.7
1,713,654	+				-1.1
1,713,728	+				-0.1
1,713,730	-				+0.7
1,713,730	-				-0.3
1,713,730	-				-0.3
1,713,730	-				+0.3
1,713,730	-				-0.4
1,713,749	-				-0.2
1,713,752	+				-1.3
1,713,756	-				+0.3
1,713,756	-				+0.0
1,713,757	+				+0.1
1,713,761	+				-0.8
1,713,761	+				-2.8
1,713,775	-				-0.6
1,713,775	-				+0.1
1,713,776	+				-0.2
1,713,776	+				-0.4
1,713,815	+				-0.6
1,713,818	+				-0.0
1,713,849	+				+0.9
1,713,850	-				+0.7
1,713,850	-				-0.3
1,713,850	-				+0.1
1,713,850	-				-0.8
1,713,851	+				-0.1
1,713,851	+				+0.1
1,713,851	+				-1.3
1,713,851	+				-0.2
1,713,852	-				+0.2
1,713,852	-				+0.8
1,713,852	-				-0.4
1,713,852	-				-2.9
1,713,852	-				+0.7
1,713,852	-				-0.2
1,713,852	-				-1.7
1,713,853	+				+0.4
1,713,853	+				-2.0
1,713,853	+				+1.1
1,713,863	-				-0.2
1,713,863	-				-1.0
1,713,864	+				+0.1
1,713,864	+				-1.9
1,713,864	+				+1.1
1,713,935	+				+0.2
1,713,954	-				-0.5
1,713,954	-				+0.5
1,713,994	-				+1.7
1,714,119	+				+0.1
1,714,119	+				+0.0
1,714,120	-				+0.6
1,714,125	+				-0.4
1,714,206	-				-1.3
1,714,214	+				+0.3
1,714,214	+				-4.5
1,714,223	-				-0.7
1,714,224	+				-0.8
1,714,327	+				-2.3