Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08745

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,609,872	+		MMJJ_RS08735	0.66	-0.4
1,609,945	+		MMJJ_RS08735	0.76	-1.0
1,609,960	-		MMJJ_RS08735	0.78	+0.5
1,609,960	-		MMJJ_RS08735	0.78	+0.5
1,609,961	+		MMJJ_RS08735	0.78	-0.3
1,609,961	+		MMJJ_RS08735	0.78	+0.2
1,609,961	+		MMJJ_RS08735	0.78	-0.3
1,609,961	+		MMJJ_RS08735	0.78	+0.4
1,609,961	+		MMJJ_RS08735	0.78	+0.1
1,609,969	-		MMJJ_RS08735	0.79	+0.5
1,609,976	-		MMJJ_RS08735	0.80	+0.5
1,609,977	+		MMJJ_RS08735	0.80	-0.7
1,610,017	-		MMJJ_RS08735	0.86	+0.3
1,610,018	+		MMJJ_RS08735	0.86	-0.3
1,610,087	+				-1.7
1,610,112	+				-2.1
1,610,117	+				+0.5
1,610,119	-				+0.4
1,610,120	+				+0.0
1,610,128	-				-2.1
1,610,148	+				+1.3
1,610,159	-				-0.7
1,610,190	-				+1.3
1,610,223	-				-0.7
1,610,224	+				+1.2
1,610,224	+				+0.4
1,610,224	+				+0.2
1,610,224	+				-0.2
1,610,241	-		MMJJ_RS08740	0.10	-0.8
1,610,241	-		MMJJ_RS08740	0.10	+0.4
1,610,242	+		MMJJ_RS08740	0.11	-0.1
1,610,305	-		MMJJ_RS08740	0.20	+0.2
1,610,306	+		MMJJ_RS08740	0.20	+0.7
1,610,306	+		MMJJ_RS08740	0.20	+0.7
1,610,309	-		MMJJ_RS08740	0.20	+0.8
1,610,309	-		MMJJ_RS08740	0.20	-0.6
1,610,309	-		MMJJ_RS08740	0.20	-2.7
1,610,310	+		MMJJ_RS08740	0.21	-3.5
1,610,310	+		MMJJ_RS08740	0.21	+0.7
1,610,310	+		MMJJ_RS08740	0.21	+0.5
1,610,310	+		MMJJ_RS08740	0.21	+0.3
1,610,310	+		MMJJ_RS08740	0.21	+1.1
1,610,310	+		MMJJ_RS08740	0.21	+0.7
1,610,344	+		MMJJ_RS08740	0.26	-0.8
1,610,346	-		MMJJ_RS08740	0.26	+1.1
1,610,381	-		MMJJ_RS08740	0.31	+0.3
1,610,395	-		MMJJ_RS08740	0.33	-0.2
1,610,396	+		MMJJ_RS08740	0.33	-0.3
1,610,422	-		MMJJ_RS08740	0.37	-0.7
1,610,423	+		MMJJ_RS08740	0.37	+0.4
1,610,427	-		MMJJ_RS08740	0.38	-0.2
1,610,428	+		MMJJ_RS08740	0.38	-2.4
1,610,503	-		MMJJ_RS08740	0.49	-0.2
1,610,546	-		MMJJ_RS08740	0.56	-0.2
1,610,546	-		MMJJ_RS08740	0.56	-0.4
1,610,547	+		MMJJ_RS08740	0.56	-0.0
1,610,561	-		MMJJ_RS08740	0.58	-0.8
1,610,565	+		MMJJ_RS08740	0.58	+0.5
1,610,565	+		MMJJ_RS08740	0.58	+0.8
1,610,565	+		MMJJ_RS08740	0.58	+0.4
1,610,576	-		MMJJ_RS08740	0.60	+0.2
1,610,576	-		MMJJ_RS08740	0.60	+1.0
1,610,577	+		MMJJ_RS08740	0.60	-0.2
1,610,577	+		MMJJ_RS08740	0.60	+0.1
1,610,577	+		MMJJ_RS08740	0.60	+0.1
1,610,578	-		MMJJ_RS08740	0.60	-0.2
1,610,579	+		MMJJ_RS08740	0.60	+0.0
1,610,579	+		MMJJ_RS08740	0.60	+0.6
1,610,579	+		MMJJ_RS08740	0.60	+0.9
1,610,594	+		MMJJ_RS08740	0.63	+0.1
1,610,622	-		MMJJ_RS08740	0.67	-0.9
1,610,622	-		MMJJ_RS08740	0.67	-0.3
1,610,622	-		MMJJ_RS08740	0.67	+0.9
1,610,623	+		MMJJ_RS08740	0.67	+1.0
1,610,623	+		MMJJ_RS08740	0.67	-2.0
1,610,623	+		MMJJ_RS08740	0.67	-1.2
1,610,623	+		MMJJ_RS08740	0.67	+1.1
1,610,630	-		MMJJ_RS08740	0.68	+1.5
1,610,630	-		MMJJ_RS08740	0.68	+0.0
1,610,630	-		MMJJ_RS08740	0.68	+0.2
1,610,630	-		MMJJ_RS08740	0.68	-4.2
1,610,631	+		MMJJ_RS08740	0.68	+0.0
1,610,722	+		MMJJ_RS08740	0.82	-0.2
1,610,739	-		MMJJ_RS08740	0.84	-0.4
1,610,739	-		MMJJ_RS08740	0.84	+0.7
1,610,739	-		MMJJ_RS08740	0.84	+0.3
1,610,749	+		MMJJ_RS08740	0.86	+0.6
1,610,752	+		MMJJ_RS08740	0.86	-2.8
1,610,752	+		MMJJ_RS08740	0.86	+0.2
1,610,762	+		MMJJ_RS08740	0.88	-1.0
1,610,793	-				+0.4
1,610,793	-				+0.2
1,610,794	+				+0.6
1,610,794	+				-1.6
1,610,796	+				+0.9
1,610,809	+				-0.8
1,610,809	+				-0.9
1,610,829	-				+1.8
1,610,863	+				+0.1
1,610,871	+				-0.7
1,610,873	-				-1.3
1,610,874	+				-0.4
1,610,935	+				-1.0
1,610,972	-		MMJJ_RS08745	0.10	+1.4
1,611,024	-		MMJJ_RS08745	0.15	+0.9
1,611,048	+		MMJJ_RS08745	0.17	+0.2
1,611,053	-		MMJJ_RS08745	0.18	+0.5
1,611,112	-		MMJJ_RS08745	0.24	+0.8
1,611,112	-		MMJJ_RS08745	0.24	-0.3
1,611,120	-		MMJJ_RS08745	0.24	-5.0
1,611,120	-		MMJJ_RS08745	0.24	-0.1
1,611,121	+		MMJJ_RS08745	0.24	+0.7
1,611,121	+		MMJJ_RS08745	0.24	+0.4
1,611,131	-		MMJJ_RS08745	0.25	-5.5
1,611,133	-		MMJJ_RS08745	0.25	-0.2
1,611,134	+		MMJJ_RS08745	0.26	+0.7
1,611,174	+		MMJJ_RS08745	0.29	-0.1
1,611,230	-		MMJJ_RS08745	0.35	+0.3
1,611,230	-		MMJJ_RS08745	0.35	+1.3
1,611,230	-		MMJJ_RS08745	0.35	+0.0
1,611,230	-		MMJJ_RS08745	0.35	+1.8
1,611,231	+		MMJJ_RS08745	0.35	+0.2
1,611,235	-		MMJJ_RS08745	0.35	+0.3
1,611,267	-		MMJJ_RS08745	0.38	+0.7
1,611,268	+		MMJJ_RS08745	0.38	-4.0
1,611,279	+		MMJJ_RS08745	0.39	-0.1
1,611,284	-		MMJJ_RS08745	0.40	-0.1
1,611,285	+		MMJJ_RS08745	0.40	-0.2
1,611,336	+		MMJJ_RS08745	0.45	-1.2
1,611,340	-		MMJJ_RS08745	0.45	+0.6
1,611,340	-		MMJJ_RS08745	0.45	-1.0
1,611,340	-		MMJJ_RS08745	0.45	+0.7
1,611,341	+		MMJJ_RS08745	0.45	+0.6
1,611,341	+		MMJJ_RS08745	0.45	-0.1
1,611,341	+		MMJJ_RS08745	0.45	+0.3
1,611,343	+		MMJJ_RS08745	0.45	-0.1
1,611,343	+		MMJJ_RS08745	0.45	+0.7
1,611,346	-		MMJJ_RS08745	0.46	-3.8
1,611,348	-		MMJJ_RS08745	0.46	+0.1
1,611,536	-		MMJJ_RS08745	0.64	-0.2
1,611,537	+		MMJJ_RS08745	0.64	+0.5
1,611,539	-		MMJJ_RS08745	0.64	-2.0
1,611,588	-		MMJJ_RS08745	0.68	+0.3
1,611,599	-		MMJJ_RS08745	0.69	+1.2
1,611,600	+		MMJJ_RS08745	0.70	-0.5
1,611,627	-		MMJJ_RS08745	0.72	-0.0
1,611,641	-		MMJJ_RS08745	0.73	-0.1
1,611,656	+		MMJJ_RS08745	0.75	+0.4
1,611,702	-		MMJJ_RS08745	0.79	+0.6
1,611,743	-		MMJJ_RS08745	0.83	+1.0
1,611,744	+		MMJJ_RS08745	0.83	+0.7
1,611,765	-		MMJJ_RS08745	0.85	-0.8
1,611,800	-		MMJJ_RS08745	0.88	-1.0
1,611,800	-		MMJJ_RS08745	0.88	-0.2
1,611,800	-				+2.0
1,611,800	-		MMJJ_RS08745	0.88	-0.9
1,611,800	-		MMJJ_RS08745	0.88	-0.4
1,611,800	-		MMJJ_RS08745	0.88	+0.5
1,611,801	+		MMJJ_RS08745	0.89	+0.3
1,611,801	+		MMJJ_RS08745	0.89	-0.3
1,611,808	+		MMJJ_RS08745	0.89	+0.6
1,611,825	-				-0.2
1,611,828	+				-0.6
1,611,912	+				-4.0
1,611,947	-				+0.8
1,611,985	+				+0.2
1,612,030	+				-0.3
1,612,030	+				-0.6
1,612,031	-				-0.9
1,612,031	-				-1.2
1,612,031	-				-0.2
1,612,032	+				-0.9
1,612,032	+				+0.6
1,612,032	+				+1.1
1,612,032	+				-0.8
1,612,032	+				-2.2
1,612,032	+				-3.3
1,612,033	-		MMJJ_RS08750	0.10	+0.2
1,612,033	-		MMJJ_RS08750	0.10	-0.2
1,612,033	-		MMJJ_RS08750	0.10	-1.6
1,612,033	-		MMJJ_RS08750	0.10	-0.2
1,612,033	-		MMJJ_RS08750	0.10	-2.4
1,612,034	+		MMJJ_RS08750	0.10	-0.5
1,612,034	+		MMJJ_RS08750	0.10	+0.8
1,612,034	+		MMJJ_RS08750	0.10	-0.8
1,612,034	+		MMJJ_RS08750	0.10	-1.0
1,612,034	+		MMJJ_RS08750	0.10	-2.2
1,612,106	-		MMJJ_RS08750	0.16	-0.1
1,612,107	+		MMJJ_RS08750	0.16	-4.1
1,612,118	+		MMJJ_RS08750	0.17	-4.6
1,612,185	+		MMJJ_RS08750	0.22	-2.1
1,612,191	-		MMJJ_RS08750	0.23	-2.1
1,612,192	+		MMJJ_RS08750	0.23	-0.3
1,612,220	-		MMJJ_RS08750	0.25	-0.7
1,612,221	+		MMJJ_RS08750	0.25	-0.1
1,612,322	+		MMJJ_RS08750	0.33	-1.5
1,612,326	-		MMJJ_RS08750	0.34	-3.0
1,612,327	+		MMJJ_RS08750	0.34	-3.8
1,612,327	+		MMJJ_RS08750	0.34	+0.1
1,612,347	-		MMJJ_RS08750	0.36	-0.6
1,612,348	+		MMJJ_RS08750	0.36	-1.1
1,612,348	+		MMJJ_RS08750	0.36	-2.0
1,612,348	+		MMJJ_RS08750	0.36	-1.1
1,612,353	-		MMJJ_RS08750	0.36	-0.4
1,612,354	+		MMJJ_RS08750	0.36	-1.0
1,612,361	-		MMJJ_RS08750	0.37	-1.5
1,612,362	+		MMJJ_RS08750	0.37	-0.5
1,612,363	-		MMJJ_RS08750	0.37	-2.9
1,612,445	+		MMJJ_RS08750	0.43	-1.5
1,612,445	+		MMJJ_RS08750	0.43	+0.3
1,612,454	-		MMJJ_RS08750	0.44	+0.6
1,612,454	-		MMJJ_RS08750	0.44	-0.6
1,612,454	-		MMJJ_RS08750	0.44	-0.2
1,612,454	-		MMJJ_RS08750	0.44	-0.2
1,612,454	-		MMJJ_RS08750	0.44	-0.9
1,612,454	-		MMJJ_RS08750	0.44	-5.2
1,612,455	+		MMJJ_RS08750	0.44	-1.5
1,612,455	+		MMJJ_RS08750	0.44	-1.0
1,612,455	+		MMJJ_RS08750	0.44	-1.2
1,612,455	+		MMJJ_RS08750	0.44	-2.0
1,612,455	+		MMJJ_RS08750	0.44	-1.6
1,612,456	-		MMJJ_RS08750	0.44	-1.5
1,612,456	-		MMJJ_RS08750	0.44	+0.1
1,612,457	+		MMJJ_RS08750	0.44	-2.2
1,612,457	+		MMJJ_RS08750	0.44	-0.1
1,612,465	-		MMJJ_RS08750	0.45	-1.1
1,612,465	-		MMJJ_RS08750	0.45	-1.0
1,612,471	+		MMJJ_RS08750	0.46	-1.3
1,612,487	+		MMJJ_RS08750	0.47	-3.3
1,612,497	-		MMJJ_RS08750	0.48	-0.9
1,612,498	+		MMJJ_RS08750	0.48	-0.7
1,612,518	-		MMJJ_RS08750	0.49	-0.2
1,612,519	+		MMJJ_RS08750	0.50	+0.3
1,612,563	-		MMJJ_RS08750	0.53	-5.6
1,612,567	+		MMJJ_RS08750	0.53	+1.5
1,612,624	+				-1.1
1,612,675	+		MMJJ_RS08750	0.62	-0.2
1,612,690	+		MMJJ_RS08750	0.63	+0.1
1,612,841	-		MMJJ_RS08750	0.76	-0.4
1,612,841	-		MMJJ_RS08750	0.76	-1.6
1,612,842	+		MMJJ_RS08750	0.76	-0.5
1,612,842	+		MMJJ_RS08750	0.76	-0.5
1,612,860	+		MMJJ_RS08750	0.77	-1.7
1,612,902	+		MMJJ_RS08750	0.81	-0.0