Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06130

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,137,652	+		MMJJ_RS06125	0.38	-0.1
1,137,681	-		MMJJ_RS06125	0.41	+0.0
1,137,682	+		MMJJ_RS06125	0.41	+0.3
1,137,695	-		MMJJ_RS06125	0.42	-1.2
1,137,695	-		MMJJ_RS06125	0.42	+0.4
1,137,695	-		MMJJ_RS06125	0.42	+0.5
1,137,696	+		MMJJ_RS06125	0.42	+0.4
1,137,696	+		MMJJ_RS06125	0.42	+1.0
1,137,717	-		MMJJ_RS06125	0.44	+1.3
1,137,718	+		MMJJ_RS06125	0.44	-0.0
1,137,763	+		MMJJ_RS06125	0.48	+0.6
1,137,796	-		MMJJ_RS06125	0.50	-0.2
1,137,796	-		MMJJ_RS06125	0.50	+0.1
1,137,802	-		MMJJ_RS06125	0.51	-1.0
1,137,816	-		MMJJ_RS06125	0.52	-0.5
1,137,817	+		MMJJ_RS06125	0.52	+0.2
1,137,817	+		MMJJ_RS06125	0.52	-0.8
1,137,819	-		MMJJ_RS06125	0.52	-1.7
1,137,822	+		MMJJ_RS06125	0.53	+0.4
1,137,822	+		MMJJ_RS06125	0.53	+0.1
1,137,857	+		MMJJ_RS06125	0.56	-5.1
1,137,913	-		MMJJ_RS06125	0.60	+0.2
1,137,918	-		MMJJ_RS06125	0.61	+0.7
1,137,919	+		MMJJ_RS06125	0.61	+0.2
1,137,975	-		MMJJ_RS06125	0.66	-1.2
1,137,981	-		MMJJ_RS06125	0.66	+1.3
1,137,982	+		MMJJ_RS06125	0.66	+0.3
1,138,048	-		MMJJ_RS06125	0.72	+0.1
1,138,075	-		MMJJ_RS06125	0.74	-0.3
1,138,076	+		MMJJ_RS06125	0.74	-2.8
1,138,076	+		MMJJ_RS06125	0.74	+0.7
1,138,087	-		MMJJ_RS06125	0.75	+0.0
1,138,146	-		MMJJ_RS06125	0.80	+1.0
1,138,147	+		MMJJ_RS06125	0.80	+0.9
1,138,147	+		MMJJ_RS06125	0.80	-2.0
1,138,196	+		MMJJ_RS06125	0.85	+0.6
1,138,219	+		MMJJ_RS06125	0.87	+0.7
1,138,246	-		MMJJ_RS06125	0.89	+0.5
1,138,247	+		MMJJ_RS06125	0.89	-1.5
1,138,249	+		MMJJ_RS06125	0.89	-3.1
1,138,253	+		MMJJ_RS06125	0.90	-2.0
1,138,267	-				-0.5
1,138,323	-				-0.9
1,138,356	-				+0.6
1,138,357	+				+1.2
1,138,360	-				+0.8
1,138,374	-				-0.6
1,138,396	-				+1.1
1,138,427	+				+1.4
1,138,430	-				+0.3
1,138,430	-				-0.2
1,138,430	-				+1.6
1,138,431	+				+0.4
1,138,431	+				+0.3
1,138,449	-				-0.5
1,138,449	-				+0.9
1,138,450	+				+0.3
1,138,450	+				+0.7
1,138,454	-				-3.4
1,138,478	-				+0.2
1,138,483	-				+0.4
1,138,484	+				-2.1
1,138,500	-				+0.2
1,138,500	-				-4.3
1,138,501	+				+0.4
1,138,501	+				+2.0
1,138,504	-				-2.0
1,138,505	+				+2.9
1,138,505	+				+1.4
1,138,507	+				+0.3
1,138,507	+				-2.4
1,138,512	-				-1.5
1,138,512	-				-0.1
1,138,513	+				-0.9
1,138,513	+				-0.2
1,138,513	+				-3.2
1,138,514	-				-0.2
1,138,514	-				-0.3
1,138,515	+				-3.8
1,138,515	+				+2.6
1,138,515	+				-0.8
1,138,515	+				-0.0
1,138,515	+				-0.3
1,138,515	+				-0.9
1,138,516	-				+0.1
1,138,516	-				-0.1
1,138,517	+				+0.3
1,138,517	+				-2.8
1,138,517	+				+0.9
1,138,549	-				+0.0
1,138,555	+				-1.6
1,138,560	-				+1.4
1,138,596	+				+0.2
1,138,599	-				+0.9
1,138,599	-				+0.8
1,138,600	+				-0.6
1,138,600	+				+0.3
1,138,600	+				+0.1
1,138,601	-				+0.2
1,138,601	-				-0.3
1,138,602	+				-3.3
1,138,602	+				+0.7
1,138,602	-				-0.4
1,138,663	+		MMJJ_RS06130	0.15	-0.1
1,138,681	-		MMJJ_RS06130	0.23	-1.6
1,138,681	-		MMJJ_RS06130	0.23	-0.9
1,138,681	-		MMJJ_RS06130	0.23	-0.5
1,138,681	-		MMJJ_RS06130	0.23	+0.9
1,138,681	-		MMJJ_RS06130	0.23	-0.1
1,138,682	+		MMJJ_RS06130	0.24	-0.1
1,138,683	-		MMJJ_RS06130	0.24	+2.7
1,138,683	-		MMJJ_RS06130	0.24	+0.3
1,138,684	+		MMJJ_RS06130	0.25	+0.5
1,138,684	+		MMJJ_RS06130	0.25	+1.8
1,138,710	-		MMJJ_RS06130	0.36	+1.2
1,138,812	+		MMJJ_RS06130	0.81	-0.4
1,138,822	-		MMJJ_RS06130	0.85	-0.1
1,138,823	+		MMJJ_RS06130	0.86	-0.1
1,138,823	+		MMJJ_RS06130	0.86	+1.0
1,138,835	-				-0.1
1,138,838	-				+0.5
1,138,838	-				-2.4
1,138,839	+				-0.5
1,138,839	+				-0.5
1,138,920	-				+0.9
1,138,920	-				-0.3
1,138,920	-				-4.4
1,138,921	+				-0.2
1,138,921	+				+0.6
1,138,923	-				-4.4
1,138,923	-				+0.6
1,138,923	-				+0.4
1,138,923	-				-0.9
1,138,924	+				+0.9
1,138,924	+				-2.8
1,138,924	+				+0.5
1,138,925	-				+0.3
1,138,925	-				+0.0
1,138,925	-				+0.4
1,138,925	-				-0.2
1,138,925	-				-2.0
1,138,925	-				+0.9
1,138,926	+				-0.1
1,138,926	+				+1.0
1,138,926	+				-2.3
1,138,927	-				-0.4
1,138,927	-				+0.1
1,138,927	-				+0.5
1,138,927	-				-1.0
1,138,928	+				+0.1
1,138,928	+				+0.1
1,138,928	+				-0.2
1,138,928	+				-1.3
1,138,928	+				-0.5
1,138,928	+				+2.1
1,138,928	+				-0.6
1,138,928	+				-0.1
1,138,931	-				-1.5
1,138,931	-				+2.4
1,138,937	-				+0.3
1,138,938	+				-1.1
1,138,966	-				-0.9
1,138,969	-				-0.0
1,138,970	+				-1.2
1,138,970	+				-1.8
1,138,978	-				-0.1
1,138,990	-				-1.1
1,138,991	+				-0.3
1,139,038	-				+0.3
1,139,083	-		MMJJ_RS06135	0.14	+0.1
1,139,084	+		MMJJ_RS06135	0.14	-0.2
1,139,084	+		MMJJ_RS06135	0.14	+1.0
1,139,084	+		MMJJ_RS06135	0.14	+0.3
1,139,182	+		MMJJ_RS06135	0.27	+0.8
1,139,184	+		MMJJ_RS06135	0.27	+0.7
1,139,197	-		MMJJ_RS06135	0.29	-1.1
1,139,197	-		MMJJ_RS06135	0.29	+0.8
1,139,198	+		MMJJ_RS06135	0.29	-0.2
1,139,247	-		MMJJ_RS06135	0.35	+0.4
1,139,247	-		MMJJ_RS06135	0.35	+0.3
1,139,247	-		MMJJ_RS06135	0.35	+0.6
1,139,247	-		MMJJ_RS06135	0.35	-1.4
1,139,247	-		MMJJ_RS06135	0.35	+0.5
1,139,247	-		MMJJ_RS06135	0.35	+0.6
1,139,247	-		MMJJ_RS06135	0.35	+1.1
1,139,248	+		MMJJ_RS06135	0.35	+0.1
1,139,248	+		MMJJ_RS06135	0.35	+0.6
1,139,250	-		MMJJ_RS06135	0.36	-0.3
1,139,251	+		MMJJ_RS06135	0.36	-0.7
1,139,305	-		MMJJ_RS06135	0.43	+1.1
1,139,305	-		MMJJ_RS06135	0.43	-1.1
1,139,306	+		MMJJ_RS06135	0.43	+0.4
1,139,332	-		MMJJ_RS06135	0.46	-1.8
1,139,359	-		MMJJ_RS06135	0.50	+0.4
1,139,377	-		MMJJ_RS06135	0.52	+0.4
1,139,394	-		MMJJ_RS06135	0.54	+0.1
1,139,394	-		MMJJ_RS06135	0.54	+0.1
1,139,394	-		MMJJ_RS06135	0.54	-2.4
1,139,396	-		MMJJ_RS06135	0.54	+0.2
1,139,411	+		MMJJ_RS06135	0.56	-1.7
1,139,413	-		MMJJ_RS06135	0.56	-0.1
1,139,414	+		MMJJ_RS06135	0.57	+0.5
1,139,436	-		MMJJ_RS06135	0.59	-1.3
1,139,437	+		MMJJ_RS06135	0.60	-0.0
1,139,437	+		MMJJ_RS06135	0.60	-0.5
1,139,439	-		MMJJ_RS06135	0.60	-0.2
1,139,489	-		MMJJ_RS06135	0.66	+0.0
1,139,489	-		MMJJ_RS06135	0.66	-0.2
1,139,490	+		MMJJ_RS06135	0.66	-0.9
1,139,533	-		MMJJ_RS06135	0.72	+1.7
1,139,560	-		MMJJ_RS06135	0.75	-2.5
1,139,589	-		MMJJ_RS06135	0.79	-1.4
1,139,589	-		MMJJ_RS06135	0.79	-0.2
1,139,589	-		MMJJ_RS06135	0.79	-0.7
1,139,590	+		MMJJ_RS06135	0.79	+0.2
1,139,590	+		MMJJ_RS06135	0.79	+0.4
1,139,591	-		MMJJ_RS06135	0.79	-0.1
1,139,594	-		MMJJ_RS06135	0.80	+1.0
1,139,594	-		MMJJ_RS06135	0.80	+0.2
1,139,595	+		MMJJ_RS06135	0.80	-0.1
1,139,651	+		MMJJ_RS06135	0.87	+1.4
1,139,651	+		MMJJ_RS06135	0.87	-0.9
1,139,671	-		MMJJ_RS06135	0.89	-0.4
1,139,693	+				-0.7
1,139,703	-				-0.6
1,139,703	-				+0.5
1,139,707	-				-0.5
1,139,708	+				-3.7
1,139,794	-				+1.3