Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05695

Experiment: McCas-formate glass attached

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas-formate glass attached
1,060,541	-		MMJJ_RS05690	0.38	+0.1
1,060,541	-		MMJJ_RS05690	0.38	-0.1
1,060,541	-		MMJJ_RS05690	0.38	-0.1
1,060,541	-		MMJJ_RS05690	0.38	+0.5
1,060,542	+		MMJJ_RS05690	0.38	-0.5
1,060,542	+		MMJJ_RS05690	0.38	-0.1
1,060,542	+		MMJJ_RS05690	0.38	+0.8
1,060,542	+		MMJJ_RS05690	0.38	-2.4
1,060,570	+		MMJJ_RS05690	0.40	+1.8
1,060,590	+		MMJJ_RS05690	0.42	+0.1
1,060,592	-		MMJJ_RS05690	0.42	+1.4
1,060,622	-		MMJJ_RS05690	0.44	+0.4
1,060,622	-		MMJJ_RS05690	0.44	-0.8
1,060,622	-		MMJJ_RS05690	0.44	-0.0
1,060,622	-		MMJJ_RS05690	0.44	-2.1
1,060,623	+		MMJJ_RS05690	0.44	-0.7
1,060,631	+		MMJJ_RS05690	0.44	+0.8
1,060,671	+		MMJJ_RS05690	0.47	+0.2
1,060,674	-		MMJJ_RS05690	0.47	+0.1
1,060,681	+		MMJJ_RS05690	0.47	+0.6
1,060,709	+		MMJJ_RS05690	0.49	-1.7
1,060,716	-		MMJJ_RS05690	0.50	-1.0
1,060,759	+		MMJJ_RS05690	0.53	+0.6
1,060,783	+		MMJJ_RS05690	0.54	+0.6
1,060,786	-		MMJJ_RS05690	0.54	-0.4
1,060,786	-		MMJJ_RS05690	0.54	+0.6
1,060,786	-		MMJJ_RS05690	0.54	+0.1
1,060,796	-		MMJJ_RS05690	0.55	-2.1
1,060,814	-		MMJJ_RS05690	0.56	+0.8
1,060,818	-		MMJJ_RS05690	0.56	+0.3
1,060,824	-		MMJJ_RS05690	0.57	-0.3
1,060,824	-		MMJJ_RS05690	0.57	-2.3
1,060,824	-		MMJJ_RS05690	0.57	+0.7
1,060,825	+		MMJJ_RS05690	0.57	+0.5
1,060,831	-		MMJJ_RS05690	0.57	-1.4
1,060,831	-		MMJJ_RS05690	0.57	-0.0
1,060,831	-		MMJJ_RS05690	0.57	+0.2
1,060,834	-		MMJJ_RS05690	0.57	+0.6
1,060,834	-		MMJJ_RS05690	0.57	+1.0
1,060,834	-		MMJJ_RS05690	0.57	+0.0
1,060,834	-		MMJJ_RS05690	0.57	-0.1
1,060,838	-		MMJJ_RS05690	0.58	-0.4
1,060,838	-		MMJJ_RS05690	0.58	+0.1
1,060,839	+		MMJJ_RS05690	0.58	-0.3
1,060,839	+		MMJJ_RS05690	0.58	+0.0
1,060,841	-		MMJJ_RS05690	0.58	+0.2
1,060,854	+		MMJJ_RS05690	0.59	-1.2
1,060,854	+		MMJJ_RS05690	0.59	-0.1
1,060,888	+		MMJJ_RS05690	0.61	+0.2
1,060,888	+		MMJJ_RS05690	0.61	+0.4
1,060,897	+		MMJJ_RS05690	0.62	-1.0
1,060,901	-		MMJJ_RS05690	0.62	+0.1
1,060,902	+		MMJJ_RS05690	0.62	+0.9
1,060,912	+		MMJJ_RS05690	0.62	+0.2
1,060,914	-		MMJJ_RS05690	0.63	-0.7
1,060,914	-		MMJJ_RS05690	0.63	+0.2
1,060,914	-		MMJJ_RS05690	0.63	-0.2
1,060,914	-		MMJJ_RS05690	0.63	+0.2
1,060,921	-		MMJJ_RS05690	0.63	+2.2
1,060,921	-		MMJJ_RS05690	0.63	+0.2
1,060,921	-		MMJJ_RS05690	0.63	-0.2
1,060,921	-		MMJJ_RS05690	0.63	+0.3
1,060,921	-		MMJJ_RS05690	0.63	+0.8
1,060,921	-		MMJJ_RS05690	0.63	+2.8
1,060,921	-		MMJJ_RS05690	0.63	+0.5
1,060,921	-		MMJJ_RS05690	0.63	+0.6
1,060,922	+		MMJJ_RS05690	0.63	-1.6
1,060,922	+		MMJJ_RS05690	0.63	+0.5
1,060,922	+		MMJJ_RS05690	0.63	-1.1
1,060,922	+		MMJJ_RS05690	0.63	+0.6
1,060,922	+		MMJJ_RS05690	0.63	+0.1
1,060,922	+		MMJJ_RS05690	0.63	+0.5
1,060,922	+		MMJJ_RS05690	0.63	+0.7
1,060,922	+		MMJJ_RS05690	0.63	-0.7
1,060,922	+		MMJJ_RS05690	0.63	-0.2
1,060,922	+		MMJJ_RS05690	0.63	-1.2
1,060,922	+		MMJJ_RS05690	0.63	-1.3
1,060,922	+		MMJJ_RS05690	0.63	+0.4
1,060,922	+		MMJJ_RS05690	0.63	+0.3
1,060,942	-		MMJJ_RS05690	0.64	-0.3
1,060,942	-		MMJJ_RS05690	0.64	-0.0
1,060,942	-		MMJJ_RS05690	0.64	-2.6
1,060,942	-		MMJJ_RS05690	0.64	+0.1
1,060,942	-		MMJJ_RS05690	0.64	+0.4
1,060,943	+		MMJJ_RS05690	0.65	+0.3
1,060,943	+		MMJJ_RS05690	0.65	-0.7
1,060,943	+		MMJJ_RS05690	0.65	+0.4
1,060,955	-		MMJJ_RS05690	0.65	+0.3
1,060,955	-		MMJJ_RS05690	0.65	+0.3
1,060,959	+		MMJJ_RS05690	0.66	-0.2
1,060,968	+		MMJJ_RS05690	0.66	-3.5
1,060,997	-		MMJJ_RS05690	0.68	+0.9
1,060,997	-		MMJJ_RS05690	0.68	+0.4
1,061,023	+		MMJJ_RS05690	0.70	+0.3
1,061,028	+		MMJJ_RS05690	0.70	-2.2
1,061,088	+		MMJJ_RS05690	0.74	+0.7
1,061,099	+		MMJJ_RS05690	0.75	+0.3
1,061,103	+		MMJJ_RS05690	0.75	-0.3
1,061,103	+		MMJJ_RS05690	0.75	-2.2
1,061,103	+		MMJJ_RS05690	0.75	-1.6
1,061,113	-		MMJJ_RS05690	0.76	-1.3
1,061,118	+		MMJJ_RS05690	0.76	+1.6
1,061,118	+		MMJJ_RS05690	0.76	+0.7
1,061,155	+		MMJJ_RS05690	0.78	+0.4
1,061,166	-		MMJJ_RS05690	0.79	+0.1
1,061,167	+		MMJJ_RS05690	0.79	+0.4
1,061,222	-		MMJJ_RS05690	0.83	+0.0
1,061,222	-		MMJJ_RS05690	0.83	-0.6
1,061,223	+		MMJJ_RS05690	0.83	-0.0
1,061,223	+		MMJJ_RS05690	0.83	-0.7
1,061,223	+		MMJJ_RS05690	0.83	-1.4
1,061,223	+		MMJJ_RS05690	0.83	+0.9
1,061,224	-		MMJJ_RS05690	0.83	-0.6
1,061,224	-		MMJJ_RS05690	0.83	-0.7
1,061,224	-		MMJJ_RS05690	0.83	-0.4
1,061,224	-		MMJJ_RS05690	0.83	-2.8
1,061,224	-		MMJJ_RS05690	0.83	-2.3
1,061,225	+		MMJJ_RS05690	0.83	-0.2
1,061,225	+		MMJJ_RS05690	0.83	-1.2
1,061,225	+		MMJJ_RS05690	0.83	+0.4
1,061,225	+		MMJJ_RS05690	0.83	-0.5
1,061,225	+		MMJJ_RS05690	0.83	-1.4
1,061,225	+		MMJJ_RS05690	0.83	+0.1
1,061,225	+		MMJJ_RS05690	0.83	+1.1
1,061,226	-		MMJJ_RS05690	0.83	-3.3
1,061,226	-		MMJJ_RS05690	0.83	-0.4
1,061,226	-		MMJJ_RS05690	0.83	+0.3
1,061,226	-		MMJJ_RS05690	0.83	-0.2
1,061,226	-		MMJJ_RS05690	0.83	-4.7
1,061,226	-		MMJJ_RS05690	0.83	+1.3
1,061,226	-		MMJJ_RS05690	0.83	-1.1
1,061,226	-		MMJJ_RS05690	0.83	+0.3
1,061,226	-		MMJJ_RS05690	0.83	-1.1
1,061,226	-		MMJJ_RS05690	0.83	-5.3
1,061,226	-		MMJJ_RS05690	0.83	-2.2
1,061,226	-		MMJJ_RS05690	0.83	+0.5
1,061,226	-		MMJJ_RS05690	0.83	-3.8
1,061,226	-		MMJJ_RS05690	0.83	-0.4
1,061,226	-		MMJJ_RS05690	0.83	+0.6
1,061,226	-		MMJJ_RS05690	0.83	-1.1
1,061,227	+		MMJJ_RS05690	0.83	+0.3
1,061,227	+		MMJJ_RS05690	0.83	+0.5
1,061,227	+		MMJJ_RS05690	0.83	+0.2
1,061,227	+		MMJJ_RS05690	0.83	+0.3
1,061,227	+		MMJJ_RS05690	0.83	+0.7
1,061,227	+		MMJJ_RS05690	0.83	-0.6
1,061,227	+		MMJJ_RS05690	0.83	+0.0
1,061,232	-		MMJJ_RS05690	0.83	-2.4
1,061,232	-		MMJJ_RS05690	0.83	-1.0
1,061,232	-		MMJJ_RS05690	0.83	-0.6
1,061,232	-		MMJJ_RS05690	0.83	+0.2
1,061,232	-		MMJJ_RS05690	0.83	+0.4
1,061,233	+		MMJJ_RS05690	0.83	+0.2
1,061,233	+		MMJJ_RS05690	0.83	+0.1
1,061,233	+		MMJJ_RS05690	0.83	-4.3
1,061,248	-		MMJJ_RS05690	0.84	+0.2
1,061,248	-		MMJJ_RS05690	0.84	+0.6
1,061,289	-		MMJJ_RS05690	0.87	-0.4
1,061,290	+		MMJJ_RS05690	0.87	-2.3
1,061,290	+		MMJJ_RS05690	0.87	-2.2
1,061,292	-		MMJJ_RS05690	0.87	-0.3
1,061,293	+		MMJJ_RS05690	0.87	+0.6
1,061,293	+		MMJJ_RS05690	0.87	-0.4
1,061,293	+		MMJJ_RS05690	0.87	+0.7
1,061,293	+		MMJJ_RS05690	0.87	-0.6
1,061,297	-		MMJJ_RS05690	0.88	-0.2
1,061,297	-		MMJJ_RS05690	0.88	+0.6
1,061,297	-		MMJJ_RS05690	0.88	-4.9
1,061,297	-		MMJJ_RS05690	0.88	-0.2
1,061,297	-		MMJJ_RS05690	0.88	+0.2
1,061,298	+		MMJJ_RS05690	0.88	+0.3
1,061,298	+		MMJJ_RS05690	0.88	-0.1
1,061,298	+		MMJJ_RS05690	0.88	-2.6
1,061,299	-		MMJJ_RS05690	0.88	-0.3
1,061,299	-		MMJJ_RS05690	0.88	+0.2
1,061,299	-		MMJJ_RS05690	0.88	-0.5
1,061,299	-		MMJJ_RS05690	0.88	+0.2
1,061,299	-		MMJJ_RS05690	0.88	+0.2
1,061,299	-		MMJJ_RS05690	0.88	+0.3
1,061,300	+		MMJJ_RS05690	0.88	-0.7
1,061,300	+		MMJJ_RS05690	0.88	+0.5
1,061,300	+		MMJJ_RS05690	0.88	-0.1
1,061,300	+		MMJJ_RS05690	0.88	+0.4
1,061,300	+		MMJJ_RS05690	0.88	-0.5
1,061,336	+				+0.3
1,061,337	-				-0.0
1,061,337	-				-0.3
1,061,337	-				-0.6
1,061,338	+				+0.6
1,061,338	+				+0.7
1,061,338	+				-0.3
1,061,338	+				+0.1
1,061,338	+				+0.1
1,061,341	-				+0.1
1,061,341	-				-1.2
1,061,342	+				+0.1
1,061,365	+				-1.5
1,061,368	+				-1.8
1,061,368	+				-0.3
1,061,368	+				+0.2
1,061,370	-				-0.6
1,061,370	-				-0.0
1,061,370	-				-0.3
1,061,370	-				+1.3
1,061,370	-				+0.1
1,061,371	+				+0.5
1,061,371	+				+0.3
1,061,371	+				-1.1
1,061,374	-				+0.7
1,061,374	-				-1.4
1,061,375	+				-1.3
1,061,375	+				-0.9
1,061,376	-				-0.6
1,061,376	-				-0.3
1,061,376	-				+0.8
1,061,376	-				+0.3
1,061,377	+				-0.3
1,061,377	+				+0.3
1,061,377	+				+0.3
1,061,380	-				+0.4
1,061,381	+				+0.2
1,061,393	-				+0.3
1,061,394	+				+0.3
1,061,394	+				+1.3
1,061,394	+				-4.5
1,061,405	-				+1.1
1,061,405	-				-2.3
1,061,406	+				-0.5
1,061,406	+				-1.2
1,061,406	+				+0.1
1,061,406	+				-0.3
1,061,406	+				-4.5
1,061,406	+				-2.8
1,061,409	-				-1.3
1,061,409	-				+0.3
1,061,410	+				-2.1
1,061,410	+				-0.6
1,061,410	+				+0.0
1,061,427	-				-0.2
1,061,435	+				+0.2
1,061,440	+				-1.7
1,061,444	-				-0.1
1,061,445	+				-0.5
1,061,445	+				-1.0
1,061,445	+				-0.2
1,061,447	-				+0.3
1,061,447	-				-0.0
1,061,447	-				-0.3
1,061,447	-				+1.0
1,061,448	+				-0.3
1,061,448	+				-1.2
1,061,448	+				+0.3
1,061,448	+				-1.0
1,061,448	+				-0.2
1,061,448	+				+0.1
1,061,449	-				-1.7
1,061,449	-				-0.0
1,061,450	+				-0.5
1,061,450	+				+0.4
1,061,465	-				+0.7
1,061,465	-				+1.0
1,061,465	-				+0.5
1,061,465	-				-0.2
1,061,465	-				-0.4
1,061,465	-				+0.3
1,061,465	-				-0.6
1,061,465	-				-0.7
1,061,465	-				-0.1
1,061,465	-				+0.8
1,061,465	-				-0.2
1,061,465	-				-1.3
1,061,465	-				-0.7
1,061,466	+				+0.2
1,061,466	+				+1.9
1,061,466	+				-3.1
1,061,466	+				-0.6
1,061,466	+				-4.2
1,061,467	-				-0.3
1,061,467	-				-0.3
1,061,467	-				-0.8
1,061,468	+				+0.7
1,061,469	-				-2.7
1,061,469	-				+0.2
1,061,469	-				+0.0
1,061,469	-				-0.1
1,061,469	-				-0.6
1,061,469	-				-0.8
1,061,470	+				+0.5
1,061,470	+				-0.2
1,061,470	+				+0.7
1,061,470	+				-1.2
1,061,470	+				+0.2
1,061,470	+				+0.8
1,061,470	+				+0.0
1,061,470	+				-2.0
1,061,470	+				+0.1
1,061,482	+				+0.3
1,061,482	+				+0.0
1,061,483	-				-0.0
1,061,483	-				+0.3
1,061,483	-				+2.9
1,061,483	-				-0.3
1,061,484	+				+1.1
1,061,484	+				+0.2
1,061,485	-				+0.2
1,061,485	-				+1.4
1,061,486	+				-0.5
1,061,486	+				+0.6
1,061,489	-				+0.2
1,061,489	-				+0.4
1,061,490	+				-0.2
1,061,493	-				-0.2
1,061,539	-				-0.5
1,061,539	-				-0.4
1,061,539	-				+1.9
1,061,578	-		MMJJ_RS05695	0.26	+0.1
1,061,578	-		MMJJ_RS05695	0.26	+0.1
1,061,578	-		MMJJ_RS05695	0.26	-3.1
1,061,619	-		MMJJ_RS05695	0.45	+0.0
1,061,619	-		MMJJ_RS05695	0.45	+0.4
1,061,625	-		MMJJ_RS05695	0.47	+0.2
1,061,625	-		MMJJ_RS05695	0.47	+0.4
1,061,625	-		MMJJ_RS05695	0.47	-3.7
1,061,625	-		MMJJ_RS05695	0.47	+0.5
1,061,645	-		MMJJ_RS05695	0.56	-2.0
1,061,661	+		MMJJ_RS05695	0.64	-0.2
1,061,661	+		MMJJ_RS05695	0.64	+1.4
1,061,704	-		MMJJ_RS05695	0.83	-0.2
1,061,715	+		MMJJ_RS05695	0.88	+0.3
1,061,729	-				-3.9
1,061,730	+				+0.4
1,061,734	+				+0.6
1,061,761	-				-0.1
1,061,763	-				-0.4
1,061,764	+				-0.5
1,061,764	+				+0.8
1,061,764	+				-2.6
1,061,764	+				+0.0
1,061,764	+				-2.7
1,061,778	-				-0.1
1,061,778	-				-0.1
1,061,778	-				+1.1
1,061,779	+				-3.3
1,061,779	+				+0.1
1,061,779	+				-0.6
1,061,782	-				+0.4
1,061,794	-				+0.9
1,061,794	-				-2.4
1,061,795	+				-0.2
1,061,795	+				+0.3
1,061,811	-				+0.1
1,061,812	+				+0.2
1,061,816	-				+0.0
1,061,817	+				-4.5
1,061,831	+		MMJJ_RS05700	0.11	-1.6
1,061,851	-		MMJJ_RS05700	0.14	-0.2
1,061,860	-		MMJJ_RS05700	0.16	+0.3
1,061,860	-		MMJJ_RS05700	0.16	-0.1
1,061,869	-		MMJJ_RS05700	0.17	+0.8
1,061,892	-		MMJJ_RS05700	0.20	+1.9
1,061,907	+		MMJJ_RS05700	0.23	-0.3
1,061,907	+		MMJJ_RS05700	0.23	-0.5
1,061,913	-		MMJJ_RS05700	0.23	-0.2
1,061,913	-		MMJJ_RS05700	0.23	-0.9
1,061,913	-		MMJJ_RS05700	0.23	+0.2
1,061,913	-		MMJJ_RS05700	0.23	-3.3
1,061,914	+		MMJJ_RS05700	0.24	+0.2
1,061,914	+		MMJJ_RS05700	0.24	-0.2
1,061,914	+		MMJJ_RS05700	0.24	-0.3
1,061,968	-		MMJJ_RS05700	0.31	-2.2
1,061,971	+		MMJJ_RS05700	0.32	-0.8
1,062,003	-		MMJJ_RS05700	0.37	-3.3
1,062,027	-		MMJJ_RS05700	0.40	-0.1
1,062,107	+		MMJJ_RS05700	0.52	+0.2
1,062,119	-		MMJJ_RS05700	0.54	-0.2
1,062,198	-		MMJJ_RS05700	0.65	+0.2
1,062,199	+		MMJJ_RS05700	0.65	-1.3
1,062,221	-		MMJJ_RS05700	0.68	+2.7
1,062,222	+		MMJJ_RS05700	0.69	+0.2
1,062,222	+		MMJJ_RS05700	0.69	-0.9
1,062,222	+		MMJJ_RS05700	0.69	+0.6
1,062,223	-		MMJJ_RS05700	0.69	+0.9
1,062,223	-		MMJJ_RS05700	0.69	+0.4
1,062,224	+		MMJJ_RS05700	0.69	+1.7
1,062,224	+		MMJJ_RS05700	0.69	-3.8
1,062,280	-		MMJJ_RS05700	0.77	-0.7
1,062,304	+		MMJJ_RS05700	0.81	-0.1
1,062,331	-		MMJJ_RS05700	0.85	-0.2
1,062,331	-		MMJJ_RS05700	0.85	+0.1
1,062,332	+		MMJJ_RS05700	0.85	-1.4
1,062,338	+		MMJJ_RS05700	0.86	-1.1
1,062,367	+		MMJJ_RS05700	0.90	+0.3
1,062,393	-				-0.2
1,062,393	-				+2.5
1,062,394	+				+0.0
1,062,394	+				-0.4
1,062,395	-				-0.9
1,062,395	-				+0.6
1,062,395	-				+0.3
1,062,396	+				+0.3
1,062,396	+				-3.3
1,062,396	+				+0.5
1,062,417	-				+0.5
1,062,423	-				+0.2
1,062,423	-				-0.5
1,062,424	+				-3.8
1,062,432	-				+0.3
1,062,433	+				-0.4
1,062,433	+				-0.1
1,062,435	+				-1.0
1,062,491	+				-0.3
1,062,506	-		MMJJ_RS05705	0.11	-1.2
1,062,507	+		MMJJ_RS05705	0.11	+0.4
1,062,507	+		MMJJ_RS05705	0.11	+0.1
1,062,514	+		MMJJ_RS05705	0.12	+0.7
1,062,553	+		MMJJ_RS05705	0.18	-0.2
1,062,570	+		MMJJ_RS05705	0.21	+0.8
1,062,570	+		MMJJ_RS05705	0.21	+1.3
1,062,570	+		MMJJ_RS05705	0.21	+0.8
1,062,571	-		MMJJ_RS05705	0.21	-4.4
1,062,572	+		MMJJ_RS05705	0.21	-0.1
1,062,575	-		MMJJ_RS05705	0.21	+0.3
1,062,578	-		MMJJ_RS05705	0.22	-0.5
1,062,579	+		MMJJ_RS05705	0.22	+0.3
1,062,581	-		MMJJ_RS05705	0.22	-0.4
1,062,581	-		MMJJ_RS05705	0.22	-0.6
1,062,581	-		MMJJ_RS05705	0.22	-1.2
1,062,581	-		MMJJ_RS05705	0.22	+0.1
1,062,585	+		MMJJ_RS05705	0.23	+1.1
1,062,607	+		MMJJ_RS05705	0.26	-0.6
1,062,613	-		MMJJ_RS05705	0.27	+0.4
1,062,618	-		MMJJ_RS05705	0.28	+0.1
1,062,722	-		MMJJ_RS05705	0.44	+0.0
1,062,723	+		MMJJ_RS05705	0.45	-0.6
1,062,727	-		MMJJ_RS05705	0.45	-0.1
1,062,729	-		MMJJ_RS05705	0.45	+0.2
1,062,730	+		MMJJ_RS05705	0.46	+0.3
1,062,732	+		MMJJ_RS05705	0.46	+1.1
1,062,732	+		MMJJ_RS05705	0.46	+0.5