Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2701c

Experiment: 7H9 with Dodecyl Sulfate 0.02 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dodecyl Sulfate 0.02 vol%
3,015,073	-				-0.5
3,015,100	-				-0.1
3,015,100	-				-1.7
3,015,100	-				-0.4
3,015,135	+				-0.4
3,015,136	-				-1.3
3,015,136	-				+0.1
3,015,192	-				-0.7
3,015,899	+				-1.1
3,015,899	+				-1.0
3,016,056	+		Rv2701c	0.22	-1.1
3,016,056	+		Rv2701c	0.22	-0.0
3,016,057	-		Rv2701c	0.22	-1.1
3,016,083	-		Rv2701c	0.25	-0.7
3,016,302	+		Rv2701c	0.50	+0.1
3,016,303	-		Rv2701c	0.50	-1.2
3,016,396	-		Rv2701c	0.61	-0.6
3,016,741	+				-0.5
3,016,742	-				+1.4
3,016,820	+				-0.8
3,016,820	+				-0.4
3,016,820	+				+0.5
3,017,098	+		Rv2702	0.30	+0.2
3,017,579	+				-0.4
3,017,643	+				-0.1
3,017,643	+				-0.4
3,017,688	+				-0.3
3,017,694	+				+2.7
3,017,694	+				-0.6
3,017,694	+				+0.1