Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3300c

Experiment: 7H9 with Cetrimonium bromide 0.015 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Cetrimonium bromide 0.015 vol%
3,685,976	-				-2.4
3,686,024	+				-0.4
3,686,399	-		Rv3300c	0.45	-0.7
3,686,399	-		Rv3300c	0.45	-1.1
3,686,437	+		Rv3300c	0.49	-3.7
3,686,687	-		Rv3300c	0.77	-0.0
3,686,687	-		Rv3300c	0.77	-0.9
3,686,870	+				+1.2
3,687,094	+		Rv3301c	0.27	+0.5
3,687,280	+		Rv3301c	0.55	+0.5
3,687,443	+		Rv3301c	0.80	-0.4
3,687,443	+		Rv3301c	0.80	+1.2
3,687,444	-		Rv3301c	0.80	+1.8
3,687,444	-		Rv3301c	0.80	-0.1
3,687,565	-				-0.3
3,687,667	-				+0.1
3,687,667	-				-0.8