Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1530

Experiment: 7H9 with Cetrimonium bromide 0.015 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Cetrimonium bromide 0.015 vol%
1,730,525	+		Rv1529	0.58	+1.9
1,730,664	+		Rv1529	0.66	+1.9
1,730,968	-		Rv1529	0.84	-1.5
1,731,473	+				-0.0
1,731,521	-		Rv1530	0.13	+1.7
1,731,554	+		Rv1530	0.16	-0.4
1,731,555	-		Rv1530	0.16	-0.1
1,731,650	+		Rv1530	0.25	+0.4
1,731,651	-		Rv1530	0.25	+0.2
1,731,784	+		Rv1530	0.37	+0.7
1,731,784	+		Rv1530	0.37	+0.3
1,731,878	+		Rv1530	0.46	+0.1
1,732,420	-				+0.9
1,732,707	+		Rv1531	0.41	-1.9
1,732,791	+		Rv1531	0.56	+1.7
1,732,939	+		Rv1531	0.82	+1.1
1,733,118	-				+0.1