Experiment: 7H9 with Cetrimonium bromide 0.015 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0797 and Rv0798c overlap by 11 nucleotides Rv0798c and Rv0799c overlap by 4 nucleotides Rv0799c and Rv0800 are separated by 44 nucleotides
Rv0797: Rv0797 - Putative transposase for insertion sequence element IS1547, at 890,388 to 891,482
Rv0797
Rv0798c: Rv0798c - 29 KDa antigen CFP29, at 891,472 to 892,269
Rv0798c
Rv0799c: Rv0799c - Conserved protein, at 892,266 to 893,273
Rv0799c
Rv0800: Rv0800 - Probable aminopeptidase PepC, at 893,318 to 894,619
Rv0800
Position (kb) 892
893
894 Strain fitness (log2 ratio) -1
0
1 at 891.453 kb on + strand at 891.598 kb on + strand, within Rv0798c at 891.737 kb on + strand, within Rv0798c at 891.914 kb on - strand, within Rv0798c at 892.024 kb on - strand, within Rv0798c at 892.507 kb on + strand, within Rv0799c at 892.507 kb on + strand, within Rv0799c at 892.606 kb on - strand, within Rv0799c at 892.726 kb on + strand, within Rv0799c at 892.726 kb on + strand, within Rv0799c at 892.744 kb on + strand, within Rv0799c at 893.305 kb on + strand at 893.305 kb on + strand at 893.305 kb on + strand at 893.306 kb on - strand at 893.315 kb on + strand at 893.315 kb on + strand at 893.315 kb on + strand at 893.316 kb on - strand at 893.316 kb on - strand at 893.316 kb on - strand at 893.466 kb on - strand, within Rv0800 at 893.833 kb on - strand, within Rv0800 at 894.023 kb on + strand, within Rv0800 at 894.024 kb on - strand, within Rv0800 at 894.153 kb on + strand, within Rv0800
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Cetrimonium bromide 0.015 vol% remove 891,453 + -0.3 891,598 + Rv0798c 0.16 +0.0 891,737 + Rv0798c 0.33 -0.5 891,914 - Rv0798c 0.55 +1.7 892,024 - Rv0798c 0.69 +0.3 892,507 + Rv0799c 0.24 +0.7 892,507 + Rv0799c 0.24 -0.6 892,606 - Rv0799c 0.34 -0.3 892,726 + Rv0799c 0.46 -1.6 892,726 + Rv0799c 0.46 -0.2 892,744 + Rv0799c 0.47 -1.3 893,305 + -0.4 893,305 + -0.6 893,305 + -0.0 893,306 - -0.5 893,315 + +1.7 893,315 + -1.0 893,315 + +0.1 893,316 - -0.2 893,316 - -0.1 893,316 - -0.2 893,466 - Rv0800 0.11 -0.7 893,833 - Rv0800 0.40 +0.2 894,023 + Rv0800 0.54 -0.3 894,024 - Rv0800 0.54 +0.5 894,153 + Rv0800 0.64 +0.6
Or see this region's nucleotide sequence