Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0798c
Experiment: 7H9 with Cetrimonium bromide 0.015 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Cetrimonium bromide 0.015 vol% |
---|---|---|---|---|---|
remove | |||||
891,453 | + | -0.3 | |||
891,598 | + | Rv0798c | 0.16 | +0.0 | |
891,737 | + | Rv0798c | 0.33 | -0.5 | |
891,914 | - | Rv0798c | 0.55 | +1.7 | |
892,024 | - | Rv0798c | 0.69 | +0.3 | |
892,507 | + | Rv0799c | 0.24 | +0.7 | |
892,507 | + | Rv0799c | 0.24 | -0.6 | |
892,606 | - | Rv0799c | 0.34 | -0.3 | |
892,726 | + | Rv0799c | 0.46 | -1.6 | |
892,726 | + | Rv0799c | 0.46 | -0.2 | |
892,744 | + | Rv0799c | 0.47 | -1.3 |
Or see this region's nucleotide sequence