Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0099

Experiment: 7H9 with Cetrimonium bromide 0.015 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Cetrimonium bromide 0.015 vol%
107,245	+		Rv0097	0.59	-0.6
107,245	+		Rv0097	0.59	+0.0
107,245	+		Rv0097	0.59	+0.3
107,246	-		Rv0097	0.59	+0.2
107,246	-		Rv0097	0.59	+0.1
107,329	-		Rv0097	0.68	+0.1
107,452	+		Rv0097	0.83	-1.2
107,452	+		Rv0097	0.83	-0.8
107,453	-		Rv0097	0.83	-1.2
107,453	-		Rv0097	0.83	-0.3
107,453	-		Rv0097	0.83	-0.4
107,453	-		Rv0097	0.83	-0.6
107,453	-		Rv0097	0.83	-0.1
107,453	-		Rv0097	0.83	-0.0
107,453	-		Rv0097	0.83	-1.8
107,456	+		Rv0097	0.83	+0.6
107,457	-		Rv0097	0.83	+0.1
107,457	-		Rv0097	0.83	-0.2
107,797	+		Rv0098	0.36	-0.1
107,927	+		Rv0098	0.59	+0.8
108,356	+		Rv0099	0.12	-0.4
108,393	+		Rv0099	0.15	+0.2
108,807	+		Rv0099	0.40	+0.8
108,854	+		Rv0099	0.43	+0.6
108,854	+		Rv0099	0.43	+0.2
108,855	-		Rv0099	0.43	+0.7
109,286	-		Rv0099	0.70	+1.4
109,286	-		Rv0099	0.70	+0.2
109,822	+		Rv0100	0.16	+0.7
109,916	+		Rv0100	0.56	-0.2
109,917	-		Rv0100	0.57	-0.0
110,041	-				-0.8
110,075	-				-1.1
110,075	-				+0.3
110,149	+				-1.0