Experiment: 7H9 with Hydrogen peroxide 3.97 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0230c and Rv0231 are separated by 94 nucleotides Rv0231 and Rv0232 are separated by 134 nucleotides Rv0232 and Rv0233 overlap by 4 nucleotides
Rv0230c: Rv0230c - Probable phosphotriesterase Php (parathion hydrolase) (PTE) (aryldialkylphosphatase) (paraoxonase) (a-esterase) (aryltriphosphatase) (paraoxon hydrolase), at 274,983 to 275,963
Rv0230c
Rv0231: Rv0231 - Probable acyl-CoA dehydrogenase FadE4, at 276,058 to 277,764
Rv0231
Rv0232: Rv0232 - Probable transcriptional regulatory protein (probably TetR/AcrR-family), at 277,899 to 278,588
Rv0232
Rv0233: Rv0233 - Ribonucleoside-diphosphate reductase (beta chain) NrdB (ribonucleotide reductase small chain), at 278,585 to 279,529
Rv0233
Position (kb) 276
277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 275.108 kb on - strand, within Rv0230c at 275.162 kb on - strand, within Rv0230c at 275.182 kb on - strand, within Rv0230c at 275.287 kb on + strand, within Rv0230c at 275.287 kb on + strand, within Rv0230c at 275.288 kb on - strand, within Rv0230c at 275.317 kb on + strand, within Rv0230c at 275.318 kb on - strand, within Rv0230c at 275.638 kb on + strand, within Rv0230c at 275.638 kb on + strand, within Rv0230c at 275.639 kb on - strand, within Rv0230c at 275.647 kb on + strand, within Rv0230c at 275.665 kb on + strand, within Rv0230c at 275.666 kb on - strand, within Rv0230c at 275.666 kb on - strand, within Rv0230c at 275.671 kb on + strand, within Rv0230c at 275.671 kb on + strand, within Rv0230c at 275.671 kb on + strand, within Rv0230c at 275.737 kb on + strand, within Rv0230c at 275.738 kb on - strand, within Rv0230c at 275.738 kb on - strand, within Rv0230c at 275.948 kb on + strand at 275.948 kb on + strand at 275.952 kb on + strand at 275.952 kb on + strand at 275.952 kb on + strand at 275.952 kb on + strand at 275.953 kb on - strand at 275.975 kb on + strand at 275.975 kb on + strand at 275.976 kb on - strand at 275.976 kb on - strand at 276.012 kb on + strand at 276.092 kb on - strand at 276.259 kb on + strand, within Rv0231 at 276.290 kb on - strand, within Rv0231 at 276.326 kb on - strand, within Rv0231 at 276.326 kb on - strand, within Rv0231 at 276.337 kb on + strand, within Rv0231 at 276.337 kb on + strand, within Rv0231 at 276.337 kb on + strand, within Rv0231 at 276.337 kb on + strand, within Rv0231 at 276.338 kb on - strand, within Rv0231 at 276.338 kb on - strand, within Rv0231 at 276.338 kb on - strand, within Rv0231 at 276.343 kb on + strand, within Rv0231 at 276.547 kb on + strand, within Rv0231 at 276.547 kb on + strand, within Rv0231 at 276.548 kb on - strand, within Rv0231 at 276.548 kb on - strand, within Rv0231 at 276.548 kb on - strand, within Rv0231 at 276.550 kb on + strand, within Rv0231 at 276.550 kb on + strand, within Rv0231 at 276.551 kb on - strand, within Rv0231 at 276.551 kb on - strand, within Rv0231 at 276.551 kb on - strand, within Rv0231 at 276.551 kb on - strand, within Rv0231 at 276.625 kb on + strand, within Rv0231 at 276.625 kb on + strand, within Rv0231 at 276.626 kb on - strand, within Rv0231 at 276.626 kb on - strand, within Rv0231 at 276.662 kb on - strand, within Rv0231 at 276.662 kb on - strand, within Rv0231 at 276.697 kb on + strand, within Rv0231 at 276.697 kb on + strand, within Rv0231 at 276.698 kb on - strand, within Rv0231 at 276.698 kb on - strand, within Rv0231 at 276.709 kb on + strand, within Rv0231 at 276.710 kb on - strand, within Rv0231 at 276.805 kb on + strand, within Rv0231 at 276.805 kb on + strand, within Rv0231 at 276.805 kb on + strand, within Rv0231 at 276.805 kb on + strand, within Rv0231 at 276.805 kb on + strand, within Rv0231 at 276.806 kb on - strand, within Rv0231 at 276.806 kb on - strand, within Rv0231 at 276.806 kb on - strand, within Rv0231 at 276.850 kb on + strand, within Rv0231 at 276.851 kb on - strand, within Rv0231 at 276.887 kb on - strand, within Rv0231 at 276.940 kb on + strand, within Rv0231 at 276.941 kb on - strand, within Rv0231 at 276.941 kb on - strand, within Rv0231 at 276.941 kb on - strand, within Rv0231 at 276.988 kb on + strand, within Rv0231 at 276.989 kb on - strand, within Rv0231 at 277.202 kb on + strand, within Rv0231 at 277.225 kb on + strand, within Rv0231 at 277.226 kb on - strand, within Rv0231 at 277.226 kb on - strand, within Rv0231 at 277.510 kb on + strand, within Rv0231 at 277.748 kb on - strand at 277.762 kb on + strand at 277.763 kb on - strand at 277.763 kb on - strand at 278.011 kb on + strand, within Rv0232 at 278.052 kb on + strand, within Rv0232 at 278.053 kb on - strand, within Rv0232 at 278.053 kb on - strand, within Rv0232 at 278.076 kb on + strand, within Rv0232 at 278.084 kb on + strand, within Rv0232 at 278.118 kb on + strand, within Rv0232 at 278.118 kb on + strand, within Rv0232 at 278.119 kb on - strand, within Rv0232 at 278.119 kb on - strand, within Rv0232 at 278.119 kb on - strand, within Rv0232 at 278.430 kb on + strand, within Rv0232 at 278.430 kb on + strand, within Rv0232 at 278.430 kb on + strand, within Rv0232 at 278.431 kb on - strand, within Rv0232 at 278.431 kb on - strand, within Rv0232 at 278.431 kb on - strand, within Rv0232 at 278.431 kb on - strand, within Rv0232 at 278.750 kb on + strand, within Rv0233 at 278.750 kb on + strand, within Rv0233
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Hydrogen peroxide 3.97 mM remove 275,108 - Rv0230c 0.13 -0.3 275,162 - Rv0230c 0.18 +1.4 275,182 - Rv0230c 0.20 -1.4 275,287 + Rv0230c 0.31 +0.3 275,287 + Rv0230c 0.31 -0.2 275,288 - Rv0230c 0.31 +0.2 275,317 + Rv0230c 0.34 -1.7 275,318 - Rv0230c 0.34 -0.4 275,638 + Rv0230c 0.67 -1.4 275,638 + Rv0230c 0.67 -0.1 275,639 - Rv0230c 0.67 +0.1 275,647 + Rv0230c 0.68 -0.2 275,665 + Rv0230c 0.70 -0.5 275,666 - Rv0230c 0.70 +0.1 275,666 - Rv0230c 0.70 +1.7 275,671 + Rv0230c 0.70 -0.4 275,671 + Rv0230c 0.70 -0.6 275,671 + Rv0230c 0.70 -0.7 275,737 + Rv0230c 0.77 -2.4 275,738 - Rv0230c 0.77 -0.7 275,738 - Rv0230c 0.77 -0.2 275,948 + +1.9 275,948 + -0.0 275,952 + -0.2 275,952 + -0.3 275,952 + -0.8 275,952 + -0.0 275,953 - -0.3 275,975 + -0.9 275,975 + -0.1 275,976 - -0.3 275,976 - -1.6 276,012 + -0.1 276,092 - -0.1 276,259 + Rv0231 0.12 -0.4 276,290 - Rv0231 0.14 +0.2 276,326 - Rv0231 0.16 -0.1 276,326 - Rv0231 0.16 +1.4 276,337 + Rv0231 0.16 -0.2 276,337 + Rv0231 0.16 -0.6 276,337 + Rv0231 0.16 -0.1 276,337 + Rv0231 0.16 +1.7 276,338 - Rv0231 0.16 -0.2 276,338 - Rv0231 0.16 +2.5 276,338 - Rv0231 0.16 -0.1 276,343 + Rv0231 0.17 -0.1 276,547 + Rv0231 0.29 +0.8 276,547 + Rv0231 0.29 +1.6 276,548 - Rv0231 0.29 -0.0 276,548 - Rv0231 0.29 -0.3 276,548 - Rv0231 0.29 -0.8 276,550 + Rv0231 0.29 +0.0 276,550 + Rv0231 0.29 +0.1 276,551 - Rv0231 0.29 -0.5 276,551 - Rv0231 0.29 -0.0 276,551 - Rv0231 0.29 +0.0 276,551 - Rv0231 0.29 -0.2 276,625 + Rv0231 0.33 +1.7 276,625 + Rv0231 0.33 -0.5 276,626 - Rv0231 0.33 -0.2 276,626 - Rv0231 0.33 -0.3 276,662 - Rv0231 0.35 -0.2 276,662 - Rv0231 0.35 -2.4 276,697 + Rv0231 0.37 -0.1 276,697 + Rv0231 0.37 +1.5 276,698 - Rv0231 0.37 -0.2 276,698 - Rv0231 0.37 -0.4 276,709 + Rv0231 0.38 +0.3 276,710 - Rv0231 0.38 +0.1 276,805 + Rv0231 0.44 -1.4 276,805 + Rv0231 0.44 -0.1 276,805 + Rv0231 0.44 -0.2 276,805 + Rv0231 0.44 +1.2 276,805 + Rv0231 0.44 -0.3 276,806 - Rv0231 0.44 -1.3 276,806 - Rv0231 0.44 -0.0 276,806 - Rv0231 0.44 -2.3 276,850 + Rv0231 0.46 -1.0 276,851 - Rv0231 0.46 -1.1 276,887 - Rv0231 0.49 +0.0 276,940 + Rv0231 0.52 +0.8 276,941 - Rv0231 0.52 -0.6 276,941 - Rv0231 0.52 -0.4 276,941 - Rv0231 0.52 -2.0 276,988 + Rv0231 0.54 -0.6 276,989 - Rv0231 0.55 +0.8 277,202 + Rv0231 0.67 -0.1 277,225 + Rv0231 0.68 +2.0 277,226 - Rv0231 0.68 -0.3 277,226 - Rv0231 0.68 +0.1 277,510 + Rv0231 0.85 -0.1 277,748 - -0.2 277,762 + +0.3 277,763 - -0.7 277,763 - -1.2 278,011 + Rv0232 0.16 +0.2 278,052 + Rv0232 0.22 -0.3 278,053 - Rv0232 0.22 -0.6 278,053 - Rv0232 0.22 -0.5 278,076 + Rv0232 0.26 -0.1 278,084 + Rv0232 0.27 +0.3 278,118 + Rv0232 0.32 -0.6 278,118 + Rv0232 0.32 -0.6 278,119 - Rv0232 0.32 -1.3 278,119 - Rv0232 0.32 -1.0 278,119 - Rv0232 0.32 -0.0 278,430 + Rv0232 0.77 +0.8 278,430 + Rv0232 0.77 +0.1 278,430 + Rv0232 0.77 +0.4 278,431 - Rv0232 0.77 -0.6 278,431 - Rv0232 0.77 +0.8 278,431 - Rv0232 0.77 +0.3 278,431 - Rv0232 0.77 +1.2 278,750 + Rv0233 0.17 +0.0 278,750 + Rv0233 0.17 -0.2
Or see this region's nucleotide sequence