Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS03555 and ABIE51_RS03560 are separated by 49 nucleotides ABIE51_RS03560 and ABIE51_RS03565 are separated by 33 nucleotides ABIE51_RS03565 and ABIE51_RS03570 are separated by 104 nucleotides
ABIE51_RS03555: ABIE51_RS03555 - Xaa-Pro peptidase family protein, at 782,522 to 783,775
_RS03555
ABIE51_RS03560: ABIE51_RS03560 - hypothetical protein, at 783,825 to 784,106
_RS03560
ABIE51_RS03565: ABIE51_RS03565 - lipocalin-like domain-containing protein, at 784,140 to 784,634
_RS03565
ABIE51_RS03570: ABIE51_RS03570 - LysR substrate-binding domain-containing protein, at 784,739 to 785,584
_RS03570
Position (kb) 783
784
785 Strain fitness (log2 ratio) -2
-1
0
1 at 783.035 kb on + strand, within ABIE51_RS03555 at 783.036 kb on - strand, within ABIE51_RS03555 at 783.146 kb on + strand, within ABIE51_RS03555 at 783.146 kb on + strand, within ABIE51_RS03555 at 783.273 kb on - strand, within ABIE51_RS03555 at 783.509 kb on + strand, within ABIE51_RS03555 at 783.510 kb on - strand, within ABIE51_RS03555 at 783.602 kb on + strand, within ABIE51_RS03555 at 783.668 kb on + strand at 783.668 kb on + strand at 783.668 kb on + strand at 783.668 kb on + strand at 783.668 kb on + strand at 783.669 kb on - strand at 783.669 kb on - strand at 783.669 kb on - strand at 783.669 kb on - strand at 783.669 kb on - strand at 783.710 kb on + strand at 783.711 kb on - strand at 783.711 kb on - strand at 783.711 kb on - strand at 783.791 kb on + strand at 783.791 kb on + strand at 783.792 kb on - strand at 783.792 kb on - strand at 783.792 kb on - strand at 783.845 kb on - strand at 783.915 kb on + strand, within ABIE51_RS03560 at 783.915 kb on + strand, within ABIE51_RS03560 at 783.916 kb on - strand, within ABIE51_RS03560 at 783.916 kb on - strand, within ABIE51_RS03560 at 783.916 kb on - strand, within ABIE51_RS03560 at 783.922 kb on - strand, within ABIE51_RS03560 at 783.930 kb on + strand, within ABIE51_RS03560 at 783.990 kb on + strand, within ABIE51_RS03560 at 783.991 kb on - strand, within ABIE51_RS03560 at 784.201 kb on + strand, within ABIE51_RS03565 at 784.202 kb on - strand, within ABIE51_RS03565 at 784.229 kb on - strand, within ABIE51_RS03565 at 784.229 kb on - strand, within ABIE51_RS03565 at 784.327 kb on + strand, within ABIE51_RS03565 at 784.708 kb on - strand at 784.716 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 783,035 + ABIE51_RS03555 0.41 +0.0 783,036 - ABIE51_RS03555 0.41 +0.3 783,146 + ABIE51_RS03555 0.50 -0.2 783,146 + ABIE51_RS03555 0.50 -0.1 783,273 - ABIE51_RS03555 0.60 -0.3 783,509 + ABIE51_RS03555 0.79 -0.3 783,510 - ABIE51_RS03555 0.79 -1.9 783,602 + ABIE51_RS03555 0.86 -0.2 783,668 + -0.1 783,668 + -0.6 783,668 + +0.6 783,668 + -0.4 783,668 + +0.8 783,669 - +0.1 783,669 - +0.1 783,669 - +0.2 783,669 - +0.0 783,669 - +0.6 783,710 + -0.5 783,711 - +0.2 783,711 - -0.3 783,711 - +0.3 783,791 + +0.1 783,791 + -0.2 783,792 - -1.0 783,792 - +0.2 783,792 - +0.2 783,845 - -0.2 783,915 + ABIE51_RS03560 0.32 -0.5 783,915 + ABIE51_RS03560 0.32 +0.1 783,916 - ABIE51_RS03560 0.32 +0.2 783,916 - ABIE51_RS03560 0.32 -0.6 783,916 - ABIE51_RS03560 0.32 -0.4 783,922 - ABIE51_RS03560 0.34 -0.6 783,930 + ABIE51_RS03560 0.37 -2.0 783,990 + ABIE51_RS03560 0.59 -1.2 783,991 - ABIE51_RS03560 0.59 -0.1 784,201 + ABIE51_RS03565 0.12 -0.0 784,202 - ABIE51_RS03565 0.13 +0.6 784,229 - ABIE51_RS03565 0.18 +0.7 784,229 - ABIE51_RS03565 0.18 -1.1 784,327 + ABIE51_RS03565 0.38 +0.0 784,708 - -0.2 784,716 - +0.2
Or see this region's nucleotide sequence