Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02174

Experiment: 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02171 and MPMX20_02172 are separated by 1 nucleotidesMPMX20_02172 and MPMX20_02173 are separated by 262 nucleotidesMPMX20_02173 and MPMX20_02174 overlap by 4 nucleotidesMPMX20_02174 and MPMX20_02175 overlap by 4 nucleotides MPMX20_02171: MPMX20_02171 - hypothetical protein, at 2,263,342 to 2,264,112 _02171 MPMX20_02172: MPMX20_02172 - hypothetical protein, at 2,264,114 to 2,264,311 _02172 MPMX20_02173: MPMX20_02173 - hypothetical protein, at 2,264,574 to 2,265,008 _02173 MPMX20_02174: MPMX20_02174 - hypothetical protein, at 2,265,005 to 2,265,724 _02174 MPMX20_02175: MPMX20_02175 - hypothetical protein, at 2,265,721 to 2,266,980 _02175 Position (kb) 2265 2266Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2264.052 kb on + strandat 2264.052 kb on + strandat 2264.060 kb on - strandat 2264.121 kb on - strandat 2264.131 kb on - strandat 2264.163 kb on + strand, within MPMX20_02172at 2264.174 kb on + strand, within MPMX20_02172at 2264.177 kb on - strand, within MPMX20_02172at 2264.177 kb on - strand, within MPMX20_02172at 2264.190 kb on + strand, within MPMX20_02172at 2264.195 kb on + strand, within MPMX20_02172at 2264.198 kb on - strand, within MPMX20_02172at 2264.259 kb on + strand, within MPMX20_02172at 2264.272 kb on + strand, within MPMX20_02172at 2264.272 kb on + strand, within MPMX20_02172at 2264.350 kb on - strandat 2264.380 kb on - strandat 2264.607 kb on + strandat 2264.607 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.615 kb on - strandat 2264.620 kb on - strand, within MPMX20_02173at 2264.620 kb on - strand, within MPMX20_02173at 2264.630 kb on - strand, within MPMX20_02173at 2264.641 kb on + strand, within MPMX20_02173at 2264.651 kb on + strand, within MPMX20_02173at 2264.827 kb on + strand, within MPMX20_02173at 2264.827 kb on + strand, within MPMX20_02173at 2264.835 kb on - strand, within MPMX20_02173at 2264.840 kb on - strand, within MPMX20_02173at 2264.875 kb on - strand, within MPMX20_02173at 2264.882 kb on + strand, within MPMX20_02173at 2264.955 kb on - strand, within MPMX20_02173at 2264.966 kb on + strandat 2264.968 kb on + strandat 2264.976 kb on - strandat 2264.986 kb on - strandat 2264.995 kb on + strandat 2265.004 kb on + strandat 2265.014 kb on + strandat 2265.022 kb on - strandat 2265.040 kb on - strandat 2265.094 kb on - strand, within MPMX20_02174at 2265.094 kb on - strand, within MPMX20_02174at 2265.136 kb on - strand, within MPMX20_02174at 2265.229 kb on - strand, within MPMX20_02174at 2265.249 kb on + strand, within MPMX20_02174at 2265.249 kb on + strand, within MPMX20_02174at 2265.257 kb on - strand, within MPMX20_02174at 2265.314 kb on + strand, within MPMX20_02174at 2265.322 kb on + strand, within MPMX20_02174at 2265.368 kb on + strand, within MPMX20_02174at 2265.368 kb on + strand, within MPMX20_02174at 2265.368 kb on + strand, within MPMX20_02174at 2265.368 kb on + strand, within MPMX20_02174at 2265.373 kb on + strand, within MPMX20_02174at 2265.373 kb on + strand, within MPMX20_02174at 2265.376 kb on - strand, within MPMX20_02174at 2265.378 kb on + strand, within MPMX20_02174at 2265.381 kb on - strand, within MPMX20_02174at 2265.381 kb on - strand, within MPMX20_02174at 2265.386 kb on - strand, within MPMX20_02174at 2265.386 kb on - strand, within MPMX20_02174at 2265.415 kb on + strand, within MPMX20_02174at 2265.415 kb on + strand, within MPMX20_02174at 2265.415 kb on + strand, within MPMX20_02174at 2265.415 kb on + strand, within MPMX20_02174at 2265.423 kb on - strand, within MPMX20_02174at 2265.479 kb on - strand, within MPMX20_02174at 2265.527 kb on + strand, within MPMX20_02174at 2265.566 kb on - strand, within MPMX20_02174at 2265.570 kb on + strand, within MPMX20_02174at 2265.570 kb on + strand, within MPMX20_02174at 2265.570 kb on + strand, within MPMX20_02174at 2265.570 kb on + strand, within MPMX20_02174at 2265.573 kb on - strand, within MPMX20_02174at 2265.578 kb on - strand, within MPMX20_02174at 2265.578 kb on - strand, within MPMX20_02174at 2265.578 kb on - strand, within MPMX20_02174at 2265.648 kb on + strand, within MPMX20_02174at 2265.650 kb on - strand, within MPMX20_02174at 2265.656 kb on - strandat 2265.666 kb on + strandat 2265.693 kb on + strandat 2265.698 kb on + strandat 2265.703 kb on + strandat 2265.706 kb on - strandat 2265.769 kb on - strandat 2265.801 kb on + strandat 2265.942 kb on + strand, within MPMX20_02175at 2265.950 kb on - strand, within MPMX20_02175at 2265.950 kb on - strand, within MPMX20_02175at 2265.950 kb on - strand, within MPMX20_02175at 2265.950 kb on - strand, within MPMX20_02175at 2265.952 kb on + strand, within MPMX20_02175at 2265.988 kb on + strand, within MPMX20_02175at 2266.059 kb on - strand, within MPMX20_02175at 2266.183 kb on - strand, within MPMX20_02175at 2266.197 kb on + strand, within MPMX20_02175at 2266.209 kb on + strand, within MPMX20_02175at 2266.292 kb on + strand, within MPMX20_02175at 2266.302 kb on + strand, within MPMX20_02175at 2266.324 kb on + strand, within MPMX20_02175at 2266.326 kb on + strand, within MPMX20_02175at 2266.334 kb on - strand, within MPMX20_02175at 2266.334 kb on - strand, within MPMX20_02175at 2266.334 kb on - strand, within MPMX20_02175at 2266.334 kb on - strand, within MPMX20_02175at 2266.420 kb on - strand, within MPMX20_02175at 2266.440 kb on + strand, within MPMX20_02175at 2266.478 kb on + strand, within MPMX20_02175at 2266.515 kb on + strand, within MPMX20_02175at 2266.549 kb on + strand, within MPMX20_02175at 2266.571 kb on - strand, within MPMX20_02175at 2266.591 kb on + strand, within MPMX20_02175at 2266.630 kb on - strand, within MPMX20_02175at 2266.680 kb on - strand, within MPMX20_02175at 2266.695 kb on - strand, within MPMX20_02175

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,264,052 + -3.3
2,264,052 + -0.2
2,264,060 - +0.3
2,264,121 - +0.5
2,264,131 - +1.2
2,264,163 + MPMX20_02172 0.25 -0.7
2,264,174 + MPMX20_02172 0.30 -0.5
2,264,177 - MPMX20_02172 0.32 -2.9
2,264,177 - MPMX20_02172 0.32 +0.5
2,264,190 + MPMX20_02172 0.38 +0.8
2,264,195 + MPMX20_02172 0.41 -1.3
2,264,198 - MPMX20_02172 0.42 -0.0
2,264,259 + MPMX20_02172 0.73 -2.9
2,264,272 + MPMX20_02172 0.80 -1.4
2,264,272 + MPMX20_02172 0.80 +0.2
2,264,350 - -1.4
2,264,380 - -0.3
2,264,607 + +0.7
2,264,607 + -0.6
2,264,612 + -1.3
2,264,612 + +0.2
2,264,612 + -2.5
2,264,612 + -1.5
2,264,615 - -1.2
2,264,620 - MPMX20_02173 0.11 -0.8
2,264,620 - MPMX20_02173 0.11 +0.1
2,264,630 - MPMX20_02173 0.13 +0.5
2,264,641 + MPMX20_02173 0.15 -0.8
2,264,651 + MPMX20_02173 0.18 -2.5
2,264,827 + MPMX20_02173 0.58 -0.2
2,264,827 + MPMX20_02173 0.58 +1.0
2,264,835 - MPMX20_02173 0.60 +0.5
2,264,840 - MPMX20_02173 0.61 -1.8
2,264,875 - MPMX20_02173 0.69 -1.4
2,264,882 + MPMX20_02173 0.71 +0.5
2,264,955 - MPMX20_02173 0.88 -0.6
2,264,966 + -1.0
2,264,968 + +0.0
2,264,976 - +0.8
2,264,986 - -1.2
2,264,995 + +0.3
2,265,004 + +1.8
2,265,014 + +2.8
2,265,022 - -1.4
2,265,040 - -1.9
2,265,094 - MPMX20_02174 0.12 -1.5
2,265,094 - MPMX20_02174 0.12 -1.0
2,265,136 - MPMX20_02174 0.18 -0.8
2,265,229 - MPMX20_02174 0.31 -0.8
2,265,249 + MPMX20_02174 0.34 -0.3
2,265,249 + MPMX20_02174 0.34 +1.5
2,265,257 - MPMX20_02174 0.35 -1.7
2,265,314 + MPMX20_02174 0.43 -1.3
2,265,322 + MPMX20_02174 0.44 +0.0
2,265,368 + MPMX20_02174 0.50 -0.5
2,265,368 + MPMX20_02174 0.50 -0.6
2,265,368 + MPMX20_02174 0.50 -1.7
2,265,368 + MPMX20_02174 0.50 -2.9
2,265,373 + MPMX20_02174 0.51 +0.9
2,265,373 + MPMX20_02174 0.51 -1.0
2,265,376 - MPMX20_02174 0.52 +0.3
2,265,378 + MPMX20_02174 0.52 -0.0
2,265,381 - MPMX20_02174 0.52 -4.5
2,265,381 - MPMX20_02174 0.52 -0.5
2,265,386 - MPMX20_02174 0.53 +0.3
2,265,386 - MPMX20_02174 0.53 +0.5
2,265,415 + MPMX20_02174 0.57 +0.1
2,265,415 + MPMX20_02174 0.57 +1.5
2,265,415 + MPMX20_02174 0.57 +0.9
2,265,415 + MPMX20_02174 0.57 -0.5
2,265,423 - MPMX20_02174 0.58 -0.6
2,265,479 - MPMX20_02174 0.66 -1.2
2,265,527 + MPMX20_02174 0.72 +0.8
2,265,566 - MPMX20_02174 0.78 -0.5
2,265,570 + MPMX20_02174 0.78 -1.5
2,265,570 + MPMX20_02174 0.78 -0.5
2,265,570 + MPMX20_02174 0.78 -0.7
2,265,570 + MPMX20_02174 0.78 -1.0
2,265,573 - MPMX20_02174 0.79 -0.5
2,265,578 - MPMX20_02174 0.80 -1.6
2,265,578 - MPMX20_02174 0.80 -1.5
2,265,578 - MPMX20_02174 0.80 -1.0
2,265,648 + MPMX20_02174 0.89 +0.0
2,265,650 - MPMX20_02174 0.90 +0.6
2,265,656 - -1.3
2,265,666 + -0.8
2,265,693 + -0.3
2,265,698 + +1.0
2,265,703 + +0.8
2,265,706 - -0.1
2,265,769 - -0.6
2,265,801 + -2.6
2,265,942 + MPMX20_02175 0.18 +0.2
2,265,950 - MPMX20_02175 0.18 -0.3
2,265,950 - MPMX20_02175 0.18 -2.5
2,265,950 - MPMX20_02175 0.18 -1.1
2,265,950 - MPMX20_02175 0.18 -1.3
2,265,952 + MPMX20_02175 0.18 -0.2
2,265,988 + MPMX20_02175 0.21 -0.0
2,266,059 - MPMX20_02175 0.27 +0.4
2,266,183 - MPMX20_02175 0.37 -1.0
2,266,197 + MPMX20_02175 0.38 -0.1
2,266,209 + MPMX20_02175 0.39 -2.6
2,266,292 + MPMX20_02175 0.45 -1.6
2,266,302 + MPMX20_02175 0.46 -0.3
2,266,324 + MPMX20_02175 0.48 -1.9
2,266,326 + MPMX20_02175 0.48 +1.2
2,266,334 - MPMX20_02175 0.49 -0.3
2,266,334 - MPMX20_02175 0.49 +1.2
2,266,334 - MPMX20_02175 0.49 +0.4
2,266,334 - MPMX20_02175 0.49 -1.5
2,266,420 - MPMX20_02175 0.55 +0.5
2,266,440 + MPMX20_02175 0.57 -1.1
2,266,478 + MPMX20_02175 0.60 -0.7
2,266,515 + MPMX20_02175 0.63 -0.2
2,266,549 + MPMX20_02175 0.66 -0.0
2,266,571 - MPMX20_02175 0.67 +0.3
2,266,591 + MPMX20_02175 0.69 +1.0
2,266,630 - MPMX20_02175 0.72 -1.2
2,266,680 - MPMX20_02175 0.76 -1.6
2,266,695 - MPMX20_02175 0.77 -0.4

Or see this region's nucleotide sequence