Experiment: 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02171 and MPMX20_02172 are separated by 1 nucleotides MPMX20_02172 and MPMX20_02173 are separated by 262 nucleotides MPMX20_02173 and MPMX20_02174 overlap by 4 nucleotides MPMX20_02174 and MPMX20_02175 overlap by 4 nucleotides
MPMX20_02171: MPMX20_02171 - hypothetical protein, at 2,263,342 to 2,264,112
_02171
MPMX20_02172: MPMX20_02172 - hypothetical protein, at 2,264,114 to 2,264,311
_02172
MPMX20_02173: MPMX20_02173 - hypothetical protein, at 2,264,574 to 2,265,008
_02173
MPMX20_02174: MPMX20_02174 - hypothetical protein, at 2,265,005 to 2,265,724
_02174
MPMX20_02175: MPMX20_02175 - hypothetical protein, at 2,265,721 to 2,266,980
_02175
Position (kb)
2265
2266 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2264.052 kb on + strand at 2264.052 kb on + strand at 2264.060 kb on - strand at 2264.121 kb on - strand at 2264.131 kb on - strand at 2264.163 kb on + strand, within MPMX20_02172 at 2264.174 kb on + strand, within MPMX20_02172 at 2264.177 kb on - strand, within MPMX20_02172 at 2264.177 kb on - strand, within MPMX20_02172 at 2264.190 kb on + strand, within MPMX20_02172 at 2264.195 kb on + strand, within MPMX20_02172 at 2264.198 kb on - strand, within MPMX20_02172 at 2264.259 kb on + strand, within MPMX20_02172 at 2264.272 kb on + strand, within MPMX20_02172 at 2264.272 kb on + strand, within MPMX20_02172 at 2264.350 kb on - strand at 2264.380 kb on - strand at 2264.607 kb on + strand at 2264.607 kb on + strand at 2264.612 kb on + strand at 2264.612 kb on + strand at 2264.612 kb on + strand at 2264.612 kb on + strand at 2264.615 kb on - strand at 2264.620 kb on - strand, within MPMX20_02173 at 2264.620 kb on - strand, within MPMX20_02173 at 2264.630 kb on - strand, within MPMX20_02173 at 2264.641 kb on + strand, within MPMX20_02173 at 2264.651 kb on + strand, within MPMX20_02173 at 2264.827 kb on + strand, within MPMX20_02173 at 2264.827 kb on + strand, within MPMX20_02173 at 2264.835 kb on - strand, within MPMX20_02173 at 2264.840 kb on - strand, within MPMX20_02173 at 2264.875 kb on - strand, within MPMX20_02173 at 2264.882 kb on + strand, within MPMX20_02173 at 2264.955 kb on - strand, within MPMX20_02173 at 2264.966 kb on + strand at 2264.968 kb on + strand at 2264.976 kb on - strand at 2264.986 kb on - strand at 2264.995 kb on + strand at 2265.004 kb on + strand at 2265.014 kb on + strand at 2265.022 kb on - strand at 2265.040 kb on - strand at 2265.094 kb on - strand, within MPMX20_02174 at 2265.094 kb on - strand, within MPMX20_02174 at 2265.136 kb on - strand, within MPMX20_02174 at 2265.229 kb on - strand, within MPMX20_02174 at 2265.249 kb on + strand, within MPMX20_02174 at 2265.249 kb on + strand, within MPMX20_02174 at 2265.257 kb on - strand, within MPMX20_02174 at 2265.314 kb on + strand, within MPMX20_02174 at 2265.322 kb on + strand, within MPMX20_02174 at 2265.368 kb on + strand, within MPMX20_02174 at 2265.368 kb on + strand, within MPMX20_02174 at 2265.368 kb on + strand, within MPMX20_02174 at 2265.368 kb on + strand, within MPMX20_02174 at 2265.373 kb on + strand, within MPMX20_02174 at 2265.373 kb on + strand, within MPMX20_02174 at 2265.376 kb on - strand, within MPMX20_02174 at 2265.378 kb on + strand, within MPMX20_02174 at 2265.381 kb on - strand, within MPMX20_02174 at 2265.381 kb on - strand, within MPMX20_02174 at 2265.386 kb on - strand, within MPMX20_02174 at 2265.386 kb on - strand, within MPMX20_02174 at 2265.415 kb on + strand, within MPMX20_02174 at 2265.415 kb on + strand, within MPMX20_02174 at 2265.415 kb on + strand, within MPMX20_02174 at 2265.415 kb on + strand, within MPMX20_02174 at 2265.423 kb on - strand, within MPMX20_02174 at 2265.479 kb on - strand, within MPMX20_02174 at 2265.527 kb on + strand, within MPMX20_02174 at 2265.566 kb on - strand, within MPMX20_02174 at 2265.570 kb on + strand, within MPMX20_02174 at 2265.570 kb on + strand, within MPMX20_02174 at 2265.570 kb on + strand, within MPMX20_02174 at 2265.570 kb on + strand, within MPMX20_02174 at 2265.573 kb on - strand, within MPMX20_02174 at 2265.578 kb on - strand, within MPMX20_02174 at 2265.578 kb on - strand, within MPMX20_02174 at 2265.578 kb on - strand, within MPMX20_02174 at 2265.648 kb on + strand, within MPMX20_02174 at 2265.650 kb on - strand, within MPMX20_02174 at 2265.656 kb on - strand at 2265.666 kb on + strand at 2265.693 kb on + strand at 2265.698 kb on + strand at 2265.703 kb on + strand at 2265.706 kb on - strand at 2265.769 kb on - strand at 2265.801 kb on + strand at 2265.942 kb on + strand, within MPMX20_02175 at 2265.950 kb on - strand, within MPMX20_02175 at 2265.950 kb on - strand, within MPMX20_02175 at 2265.950 kb on - strand, within MPMX20_02175 at 2265.950 kb on - strand, within MPMX20_02175 at 2265.952 kb on + strand, within MPMX20_02175 at 2265.988 kb on + strand, within MPMX20_02175 at 2266.059 kb on - strand, within MPMX20_02175 at 2266.183 kb on - strand, within MPMX20_02175 at 2266.197 kb on + strand, within MPMX20_02175 at 2266.209 kb on + strand, within MPMX20_02175 at 2266.292 kb on + strand, within MPMX20_02175 at 2266.302 kb on + strand, within MPMX20_02175 at 2266.324 kb on + strand, within MPMX20_02175 at 2266.326 kb on + strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.420 kb on - strand, within MPMX20_02175 at 2266.440 kb on + strand, within MPMX20_02175 at 2266.478 kb on + strand, within MPMX20_02175 at 2266.515 kb on + strand, within MPMX20_02175 at 2266.549 kb on + strand, within MPMX20_02175 at 2266.571 kb on - strand, within MPMX20_02175 at 2266.591 kb on + strand, within MPMX20_02175 at 2266.630 kb on - strand, within MPMX20_02175 at 2266.680 kb on - strand, within MPMX20_02175 at 2266.695 kb on - strand, within MPMX20_02175
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,264,052 + -3.3 2,264,052 + -0.2 2,264,060 - +0.3 2,264,121 - +0.5 2,264,131 - +1.2 2,264,163 + MPMX20_02172 0.25 -0.7 2,264,174 + MPMX20_02172 0.30 -0.5 2,264,177 - MPMX20_02172 0.32 -2.9 2,264,177 - MPMX20_02172 0.32 +0.5 2,264,190 + MPMX20_02172 0.38 +0.8 2,264,195 + MPMX20_02172 0.41 -1.3 2,264,198 - MPMX20_02172 0.42 -0.0 2,264,259 + MPMX20_02172 0.73 -2.9 2,264,272 + MPMX20_02172 0.80 -1.4 2,264,272 + MPMX20_02172 0.80 +0.2 2,264,350 - -1.4 2,264,380 - -0.3 2,264,607 + +0.7 2,264,607 + -0.6 2,264,612 + -1.3 2,264,612 + +0.2 2,264,612 + -2.5 2,264,612 + -1.5 2,264,615 - -1.2 2,264,620 - MPMX20_02173 0.11 -0.8 2,264,620 - MPMX20_02173 0.11 +0.1 2,264,630 - MPMX20_02173 0.13 +0.5 2,264,641 + MPMX20_02173 0.15 -0.8 2,264,651 + MPMX20_02173 0.18 -2.5 2,264,827 + MPMX20_02173 0.58 -0.2 2,264,827 + MPMX20_02173 0.58 +1.0 2,264,835 - MPMX20_02173 0.60 +0.5 2,264,840 - MPMX20_02173 0.61 -1.8 2,264,875 - MPMX20_02173 0.69 -1.4 2,264,882 + MPMX20_02173 0.71 +0.5 2,264,955 - MPMX20_02173 0.88 -0.6 2,264,966 + -1.0 2,264,968 + +0.0 2,264,976 - +0.8 2,264,986 - -1.2 2,264,995 + +0.3 2,265,004 + +1.8 2,265,014 + +2.8 2,265,022 - -1.4 2,265,040 - -1.9 2,265,094 - MPMX20_02174 0.12 -1.5 2,265,094 - MPMX20_02174 0.12 -1.0 2,265,136 - MPMX20_02174 0.18 -0.8 2,265,229 - MPMX20_02174 0.31 -0.8 2,265,249 + MPMX20_02174 0.34 -0.3 2,265,249 + MPMX20_02174 0.34 +1.5 2,265,257 - MPMX20_02174 0.35 -1.7 2,265,314 + MPMX20_02174 0.43 -1.3 2,265,322 + MPMX20_02174 0.44 +0.0 2,265,368 + MPMX20_02174 0.50 -0.5 2,265,368 + MPMX20_02174 0.50 -0.6 2,265,368 + MPMX20_02174 0.50 -1.7 2,265,368 + MPMX20_02174 0.50 -2.9 2,265,373 + MPMX20_02174 0.51 +0.9 2,265,373 + MPMX20_02174 0.51 -1.0 2,265,376 - MPMX20_02174 0.52 +0.3 2,265,378 + MPMX20_02174 0.52 -0.0 2,265,381 - MPMX20_02174 0.52 -4.5 2,265,381 - MPMX20_02174 0.52 -0.5 2,265,386 - MPMX20_02174 0.53 +0.3 2,265,386 - MPMX20_02174 0.53 +0.5 2,265,415 + MPMX20_02174 0.57 +0.1 2,265,415 + MPMX20_02174 0.57 +1.5 2,265,415 + MPMX20_02174 0.57 +0.9 2,265,415 + MPMX20_02174 0.57 -0.5 2,265,423 - MPMX20_02174 0.58 -0.6 2,265,479 - MPMX20_02174 0.66 -1.2 2,265,527 + MPMX20_02174 0.72 +0.8 2,265,566 - MPMX20_02174 0.78 -0.5 2,265,570 + MPMX20_02174 0.78 -1.5 2,265,570 + MPMX20_02174 0.78 -0.5 2,265,570 + MPMX20_02174 0.78 -0.7 2,265,570 + MPMX20_02174 0.78 -1.0 2,265,573 - MPMX20_02174 0.79 -0.5 2,265,578 - MPMX20_02174 0.80 -1.6 2,265,578 - MPMX20_02174 0.80 -1.5 2,265,578 - MPMX20_02174 0.80 -1.0 2,265,648 + MPMX20_02174 0.89 +0.0 2,265,650 - MPMX20_02174 0.90 +0.6 2,265,656 - -1.3 2,265,666 + -0.8 2,265,693 + -0.3 2,265,698 + +1.0 2,265,703 + +0.8 2,265,706 - -0.1 2,265,769 - -0.6 2,265,801 + -2.6 2,265,942 + MPMX20_02175 0.18 +0.2 2,265,950 - MPMX20_02175 0.18 -0.3 2,265,950 - MPMX20_02175 0.18 -2.5 2,265,950 - MPMX20_02175 0.18 -1.1 2,265,950 - MPMX20_02175 0.18 -1.3 2,265,952 + MPMX20_02175 0.18 -0.2 2,265,988 + MPMX20_02175 0.21 -0.0 2,266,059 - MPMX20_02175 0.27 +0.4 2,266,183 - MPMX20_02175 0.37 -1.0 2,266,197 + MPMX20_02175 0.38 -0.1 2,266,209 + MPMX20_02175 0.39 -2.6 2,266,292 + MPMX20_02175 0.45 -1.6 2,266,302 + MPMX20_02175 0.46 -0.3 2,266,324 + MPMX20_02175 0.48 -1.9 2,266,326 + MPMX20_02175 0.48 +1.2 2,266,334 - MPMX20_02175 0.49 -0.3 2,266,334 - MPMX20_02175 0.49 +1.2 2,266,334 - MPMX20_02175 0.49 +0.4 2,266,334 - MPMX20_02175 0.49 -1.5 2,266,420 - MPMX20_02175 0.55 +0.5 2,266,440 + MPMX20_02175 0.57 -1.1 2,266,478 + MPMX20_02175 0.60 -0.7 2,266,515 + MPMX20_02175 0.63 -0.2 2,266,549 + MPMX20_02175 0.66 -0.0 2,266,571 - MPMX20_02175 0.67 +0.3 2,266,591 + MPMX20_02175 0.69 +1.0 2,266,630 - MPMX20_02175 0.72 -1.2 2,266,680 - MPMX20_02175 0.76 -1.6 2,266,695 - MPMX20_02175 0.77 -0.4
Or see this region's nucleotide sequence