Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04530

Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04529 and MPMX20_04530 are separated by 226 nucleotidesMPMX20_04530 and MPMX20_04531 are separated by 2 nucleotides MPMX20_04529: MPMX20_04529 - 5,10-methylenetetrahydrofolate reductase, at 4,740,736 to 4,741,626 _04529 MPMX20_04530: MPMX20_04530 - Bifunctional aspartokinase/homoserine dehydrogenase 2, at 4,741,853 to 4,744,285 _04530 MPMX20_04531: MPMX20_04531 - Cystathionine gamma-synthase, at 4,744,288 to 4,745,448 _04531 Position (kb) 4741 4742 4743 4744 4745Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3 4 5at 4740.937 kb on + strand, within MPMX20_04529at 4741.029 kb on + strand, within MPMX20_04529at 4741.070 kb on + strand, within MPMX20_04529at 4741.088 kb on - strand, within MPMX20_04529at 4741.093 kb on + strand, within MPMX20_04529at 4741.134 kb on - strand, within MPMX20_04529at 4741.163 kb on + strand, within MPMX20_04529at 4741.164 kb on + strand, within MPMX20_04529at 4741.213 kb on - strand, within MPMX20_04529at 4741.317 kb on + strand, within MPMX20_04529at 4741.320 kb on - strand, within MPMX20_04529at 4741.360 kb on - strand, within MPMX20_04529at 4741.363 kb on + strand, within MPMX20_04529at 4741.365 kb on - strand, within MPMX20_04529at 4741.365 kb on - strand, within MPMX20_04529at 4741.408 kb on - strand, within MPMX20_04529at 4741.421 kb on + strand, within MPMX20_04529at 4741.488 kb on - strand, within MPMX20_04529at 4741.506 kb on - strand, within MPMX20_04529at 4741.595 kb on - strandat 4741.634 kb on - strandat 4741.763 kb on + strandat 4741.776 kb on - strandat 4741.809 kb on + strandat 4741.811 kb on - strandat 4741.816 kb on - strandat 4741.819 kb on + strandat 4741.827 kb on + strandat 4741.837 kb on - strandat 4742.011 kb on + strandat 4742.083 kb on - strandat 4742.083 kb on - strandat 4742.094 kb on - strandat 4742.134 kb on + strand, within MPMX20_04530at 4742.137 kb on - strand, within MPMX20_04530at 4742.305 kb on + strand, within MPMX20_04530at 4742.305 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.492 kb on - strand, within MPMX20_04530at 4742.542 kb on + strand, within MPMX20_04530at 4742.542 kb on + strand, within MPMX20_04530at 4742.637 kb on - strand, within MPMX20_04530at 4742.662 kb on + strand, within MPMX20_04530at 4742.671 kb on + strand, within MPMX20_04530at 4742.679 kb on - strand, within MPMX20_04530at 4742.708 kb on + strand, within MPMX20_04530at 4742.718 kb on + strand, within MPMX20_04530at 4742.718 kb on - strand, within MPMX20_04530at 4742.748 kb on - strand, within MPMX20_04530at 4742.748 kb on - strand, within MPMX20_04530at 4742.761 kb on - strand, within MPMX20_04530at 4742.794 kb on - strand, within MPMX20_04530at 4742.860 kb on + strand, within MPMX20_04530at 4742.860 kb on + strand, within MPMX20_04530at 4742.868 kb on - strand, within MPMX20_04530at 4742.868 kb on - strand, within MPMX20_04530at 4742.868 kb on - strand, within MPMX20_04530at 4742.907 kb on - strand, within MPMX20_04530at 4742.930 kb on - strand, within MPMX20_04530at 4742.936 kb on + strand, within MPMX20_04530at 4742.946 kb on + strand, within MPMX20_04530at 4742.970 kb on + strand, within MPMX20_04530at 4742.988 kb on - strand, within MPMX20_04530at 4743.080 kb on + strand, within MPMX20_04530at 4743.085 kb on + strand, within MPMX20_04530at 4743.127 kb on + strand, within MPMX20_04530at 4743.203 kb on - strand, within MPMX20_04530at 4743.256 kb on - strand, within MPMX20_04530at 4743.331 kb on + strand, within MPMX20_04530at 4743.390 kb on - strand, within MPMX20_04530at 4743.395 kb on - strand, within MPMX20_04530at 4743.405 kb on - strand, within MPMX20_04530at 4743.423 kb on + strand, within MPMX20_04530at 4743.431 kb on - strand, within MPMX20_04530at 4743.568 kb on + strand, within MPMX20_04530at 4743.573 kb on + strand, within MPMX20_04530at 4743.573 kb on + strand, within MPMX20_04530at 4743.576 kb on - strand, within MPMX20_04530at 4743.576 kb on - strand, within MPMX20_04530at 4743.576 kb on - strand, within MPMX20_04530at 4743.576 kb on - strand, within MPMX20_04530at 4743.635 kb on + strand, within MPMX20_04530at 4743.645 kb on + strand, within MPMX20_04530at 4743.653 kb on - strand, within MPMX20_04530at 4743.653 kb on - strand, within MPMX20_04530at 4743.660 kb on - strand, within MPMX20_04530at 4743.666 kb on + strand, within MPMX20_04530at 4743.674 kb on - strand, within MPMX20_04530at 4743.718 kb on + strand, within MPMX20_04530at 4743.726 kb on - strand, within MPMX20_04530at 4743.726 kb on - strand, within MPMX20_04530at 4743.770 kb on + strand, within MPMX20_04530at 4743.773 kb on - strand, within MPMX20_04530at 4743.784 kb on - strand, within MPMX20_04530at 4743.829 kb on + strand, within MPMX20_04530at 4743.837 kb on - strand, within MPMX20_04530at 4743.841 kb on - strand, within MPMX20_04530at 4743.896 kb on - strand, within MPMX20_04530at 4743.901 kb on - strand, within MPMX20_04530at 4743.917 kb on + strand, within MPMX20_04530at 4743.917 kb on + strand, within MPMX20_04530at 4743.917 kb on + strand, within MPMX20_04530at 4743.917 kb on + strand, within MPMX20_04530at 4743.917 kb on + strand, within MPMX20_04530at 4743.921 kb on - strand, within MPMX20_04530at 4743.925 kb on - strand, within MPMX20_04530at 4744.058 kb on + strandat 4744.058 kb on + strandat 4744.058 kb on - strandat 4744.099 kb on + strandat 4744.107 kb on - strandat 4744.120 kb on + strandat 4744.157 kb on - strandat 4744.179 kb on + strandat 4744.187 kb on - strandat 4744.187 kb on - strandat 4744.208 kb on + strandat 4744.216 kb on - strandat 4744.254 kb on - strandat 4744.273 kb on - strandat 4744.285 kb on + strandat 4744.293 kb on - strandat 4744.293 kb on - strandat 4744.299 kb on - strandat 4744.355 kb on - strandat 4744.419 kb on - strand, within MPMX20_04531at 4744.420 kb on + strand, within MPMX20_04531at 4744.426 kb on + strand, within MPMX20_04531at 4744.454 kb on - strand, within MPMX20_04531at 4744.495 kb on - strand, within MPMX20_04531at 4744.499 kb on - strand, within MPMX20_04531at 4744.518 kb on + strand, within MPMX20_04531at 4744.673 kb on + strand, within MPMX20_04531at 4744.681 kb on - strand, within MPMX20_04531at 4744.681 kb on - strand, within MPMX20_04531at 4744.683 kb on + strand, within MPMX20_04531at 4744.735 kb on + strand, within MPMX20_04531at 4744.765 kb on - strand, within MPMX20_04531at 4744.775 kb on + strand, within MPMX20_04531at 4744.824 kb on - strand, within MPMX20_04531at 4744.890 kb on + strand, within MPMX20_04531at 4744.898 kb on - strand, within MPMX20_04531at 4744.903 kb on + strand, within MPMX20_04531at 4744.925 kb on + strand, within MPMX20_04531at 4744.925 kb on + strand, within MPMX20_04531at 4744.932 kb on + strand, within MPMX20_04531at 4744.932 kb on + strand, within MPMX20_04531at 4744.932 kb on - strand, within MPMX20_04531at 4744.940 kb on - strand, within MPMX20_04531at 4745.015 kb on + strand, within MPMX20_04531at 4745.144 kb on + strand, within MPMX20_04531at 4745.158 kb on - strand, within MPMX20_04531at 4745.219 kb on + strand, within MPMX20_04531at 4745.238 kb on - strand, within MPMX20_04531

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,740,937 + MPMX20_04529 0.23 +0.1
4,741,029 + MPMX20_04529 0.33 +0.5
4,741,070 + MPMX20_04529 0.37 +0.1
4,741,088 - MPMX20_04529 0.40 +0.4
4,741,093 + MPMX20_04529 0.40 -0.6
4,741,134 - MPMX20_04529 0.45 -1.3
4,741,163 + MPMX20_04529 0.48 +0.2
4,741,164 + MPMX20_04529 0.48 -0.1
4,741,213 - MPMX20_04529 0.54 -0.2
4,741,317 + MPMX20_04529 0.65 -0.0
4,741,320 - MPMX20_04529 0.66 -0.9
4,741,360 - MPMX20_04529 0.70 -0.4
4,741,363 + MPMX20_04529 0.70 -1.5
4,741,365 - MPMX20_04529 0.71 +2.0
4,741,365 - MPMX20_04529 0.71 +2.0
4,741,408 - MPMX20_04529 0.75 -0.0
4,741,421 + MPMX20_04529 0.77 +0.2
4,741,488 - MPMX20_04529 0.84 +2.4
4,741,506 - MPMX20_04529 0.86 -2.6
4,741,595 - -0.8
4,741,634 - +0.8
4,741,763 + +1.0
4,741,776 - -0.8
4,741,809 + +0.4
4,741,811 - +0.4
4,741,816 - +0.3
4,741,819 + +0.4
4,741,827 + +0.1
4,741,837 - +0.9
4,742,011 + -1.2
4,742,083 - +1.0
4,742,083 - +0.1
4,742,094 - -1.8
4,742,134 + MPMX20_04530 0.12 -1.0
4,742,137 - MPMX20_04530 0.12 -0.6
4,742,305 + MPMX20_04530 0.19 -3.6
4,742,305 + MPMX20_04530 0.19 -3.8
4,742,449 + MPMX20_04530 0.24 -0.7
4,742,449 + MPMX20_04530 0.24 -3.3
4,742,449 + MPMX20_04530 0.24 -3.4
4,742,449 + MPMX20_04530 0.24 -2.0
4,742,457 - MPMX20_04530 0.25 +1.0
4,742,457 - MPMX20_04530 0.25 -3.4
4,742,457 - MPMX20_04530 0.25 -2.7
4,742,457 - MPMX20_04530 0.25 -1.5
4,742,457 - MPMX20_04530 0.25 -3.4
4,742,457 - MPMX20_04530 0.25 -1.1
4,742,457 - MPMX20_04530 0.25 -1.0
4,742,492 - MPMX20_04530 0.26 -3.2
4,742,542 + MPMX20_04530 0.28 -1.1
4,742,542 + MPMX20_04530 0.28 -2.2
4,742,637 - MPMX20_04530 0.32 -0.4
4,742,662 + MPMX20_04530 0.33 -4.3
4,742,671 + MPMX20_04530 0.34 -3.7
4,742,679 - MPMX20_04530 0.34 -4.3
4,742,708 + MPMX20_04530 0.35 -2.9
4,742,718 + MPMX20_04530 0.36 -4.6
4,742,718 - MPMX20_04530 0.36 -2.7
4,742,748 - MPMX20_04530 0.37 -0.3
4,742,748 - MPMX20_04530 0.37 -3.4
4,742,761 - MPMX20_04530 0.37 -0.6
4,742,794 - MPMX20_04530 0.39 -3.8
4,742,860 + MPMX20_04530 0.41 -3.7
4,742,860 + MPMX20_04530 0.41 -2.3
4,742,868 - MPMX20_04530 0.42 -1.6
4,742,868 - MPMX20_04530 0.42 +0.1
4,742,868 - MPMX20_04530 0.42 +0.6
4,742,907 - MPMX20_04530 0.43 +1.0
4,742,930 - MPMX20_04530 0.44 -0.4
4,742,936 + MPMX20_04530 0.45 -2.5
4,742,946 + MPMX20_04530 0.45 -4.2
4,742,970 + MPMX20_04530 0.46 -0.2
4,742,988 - MPMX20_04530 0.47 -4.6
4,743,080 + MPMX20_04530 0.50 -2.3
4,743,085 + MPMX20_04530 0.51 -2.8
4,743,127 + MPMX20_04530 0.52 -3.7
4,743,203 - MPMX20_04530 0.55 -4.0
4,743,256 - MPMX20_04530 0.58 -5.8
4,743,331 + MPMX20_04530 0.61 -2.5
4,743,390 - MPMX20_04530 0.63 -2.8
4,743,395 - MPMX20_04530 0.63 -3.8
4,743,405 - MPMX20_04530 0.64 -3.6
4,743,423 + MPMX20_04530 0.65 -2.2
4,743,431 - MPMX20_04530 0.65 -6.3
4,743,568 + MPMX20_04530 0.70 -4.5
4,743,573 + MPMX20_04530 0.71 -1.8
4,743,573 + MPMX20_04530 0.71 -1.2
4,743,576 - MPMX20_04530 0.71 -1.6
4,743,576 - MPMX20_04530 0.71 -4.4
4,743,576 - MPMX20_04530 0.71 -3.1
4,743,576 - MPMX20_04530 0.71 -3.2
4,743,635 + MPMX20_04530 0.73 -0.5
4,743,645 + MPMX20_04530 0.74 -2.6
4,743,653 - MPMX20_04530 0.74 -3.7
4,743,653 - MPMX20_04530 0.74 -0.3
4,743,660 - MPMX20_04530 0.74 -4.4
4,743,666 + MPMX20_04530 0.75 -3.7
4,743,674 - MPMX20_04530 0.75 -1.5
4,743,718 + MPMX20_04530 0.77 -4.1
4,743,726 - MPMX20_04530 0.77 -3.6
4,743,726 - MPMX20_04530 0.77 -0.8
4,743,770 + MPMX20_04530 0.79 -2.7
4,743,773 - MPMX20_04530 0.79 +0.4
4,743,784 - MPMX20_04530 0.79 -0.6
4,743,829 + MPMX20_04530 0.81 -3.3
4,743,837 - MPMX20_04530 0.82 -4.0
4,743,841 - MPMX20_04530 0.82 -5.8
4,743,896 - MPMX20_04530 0.84 -3.9
4,743,901 - MPMX20_04530 0.84 -2.3
4,743,917 + MPMX20_04530 0.85 -3.7
4,743,917 + MPMX20_04530 0.85 -1.9
4,743,917 + MPMX20_04530 0.85 -4.5
4,743,917 + MPMX20_04530 0.85 -4.7
4,743,917 + MPMX20_04530 0.85 -2.9
4,743,921 - MPMX20_04530 0.85 -3.5
4,743,925 - MPMX20_04530 0.85 -1.0
4,744,058 + -4.3
4,744,058 + -3.3
4,744,058 - -5.1
4,744,099 + -5.2
4,744,107 - -2.0
4,744,120 + -0.6
4,744,157 - -1.7
4,744,179 + -1.3
4,744,187 - -5.8
4,744,187 - -2.8
4,744,208 + -0.6
4,744,216 - -3.2
4,744,254 - -1.8
4,744,273 - -4.8
4,744,285 + -0.6
4,744,293 - +0.4
4,744,293 - -0.0
4,744,299 - -3.1
4,744,355 - +3.0
4,744,419 - MPMX20_04531 0.11 +0.5
4,744,420 + MPMX20_04531 0.11 +0.0
4,744,426 + MPMX20_04531 0.12 +0.2
4,744,454 - MPMX20_04531 0.14 -0.3
4,744,495 - MPMX20_04531 0.18 -0.5
4,744,499 - MPMX20_04531 0.18 -1.1
4,744,518 + MPMX20_04531 0.20 -0.3
4,744,673 + MPMX20_04531 0.33 +5.7
4,744,681 - MPMX20_04531 0.34 -0.0
4,744,681 - MPMX20_04531 0.34 -1.0
4,744,683 + MPMX20_04531 0.34 -1.1
4,744,735 + MPMX20_04531 0.39 -0.3
4,744,765 - MPMX20_04531 0.41 -1.1
4,744,775 + MPMX20_04531 0.42 +0.1
4,744,824 - MPMX20_04531 0.46 +0.1
4,744,890 + MPMX20_04531 0.52 +2.6
4,744,898 - MPMX20_04531 0.53 +0.3
4,744,903 + MPMX20_04531 0.53 +1.7
4,744,925 + MPMX20_04531 0.55 -0.0
4,744,925 + MPMX20_04531 0.55 -1.0
4,744,932 + MPMX20_04531 0.55 +1.6
4,744,932 + MPMX20_04531 0.55 -1.2
4,744,932 - MPMX20_04531 0.55 +0.7
4,744,940 - MPMX20_04531 0.56 -0.8
4,745,015 + MPMX20_04531 0.63 +1.4
4,745,144 + MPMX20_04531 0.74 -1.2
4,745,158 - MPMX20_04531 0.75 -1.3
4,745,219 + MPMX20_04531 0.80 +0.7
4,745,238 - MPMX20_04531 0.82 +1.5

Or see this region's nucleotide sequence