Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04465 and MPMX20_04466 overlap by 4 nucleotides MPMX20_04466 and MPMX20_04467 overlap by 4 nucleotides MPMX20_04467 and MPMX20_04468 are separated by 374 nucleotides MPMX20_04468 and MPMX20_04469 are separated by 43 nucleotides
MPMX20_04465: MPMX20_04465 - Tyrosine recombinase XerC, at 4,669,548 to 4,670,450
_04465
MPMX20_04466: MPMX20_04466 - hypothetical protein, at 4,670,447 to 4,671,154
_04466
MPMX20_04467: MPMX20_04467 - Diaminopimelate epimerase, at 4,671,151 to 4,671,975
_04467
MPMX20_04468: MPMX20_04468 - Iron-sulfur cluster assembly protein CyaY, at 4,672,350 to 4,672,670
_04468
MPMX20_04469: MPMX20_04469 - Adenylate cyclase, at 4,672,714 to 4,675,257
_04469
Position (kb)
4671
4672 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4670.169 kb on - strand, within MPMX20_04465 at 4670.180 kb on - strand, within MPMX20_04465 at 4670.197 kb on + strand, within MPMX20_04465 at 4670.240 kb on - strand, within MPMX20_04465 at 4670.371 kb on + strand at 4670.385 kb on - strand at 4670.404 kb on - strand at 4670.404 kb on - strand at 4670.404 kb on - strand at 4670.481 kb on + strand at 4670.493 kb on - strand at 4670.518 kb on - strand, within MPMX20_04466 at 4670.535 kb on - strand, within MPMX20_04466 at 4670.561 kb on + strand, within MPMX20_04466 at 4670.652 kb on - strand, within MPMX20_04466 at 4670.662 kb on + strand, within MPMX20_04466 at 4670.746 kb on - strand, within MPMX20_04466 at 4670.757 kb on - strand, within MPMX20_04466 at 4670.788 kb on + strand, within MPMX20_04466 at 4670.852 kb on + strand, within MPMX20_04466 at 4671.009 kb on - strand, within MPMX20_04466 at 4671.194 kb on + strand at 4671.194 kb on + strand at 4671.194 kb on + strand at 4671.194 kb on + strand at 4671.194 kb on + strand at 4671.202 kb on - strand at 4671.202 kb on - strand at 4671.211 kb on + strand at 4671.219 kb on - strand at 4671.280 kb on + strand, within MPMX20_04467 at 4671.288 kb on - strand, within MPMX20_04467 at 4671.288 kb on - strand, within MPMX20_04467 at 4671.288 kb on - strand, within MPMX20_04467 at 4671.462 kb on - strand, within MPMX20_04467 at 4671.474 kb on + strand, within MPMX20_04467 at 4671.503 kb on + strand, within MPMX20_04467 at 4671.526 kb on + strand, within MPMX20_04467 at 4671.534 kb on - strand, within MPMX20_04467 at 4671.534 kb on - strand, within MPMX20_04467 at 4671.595 kb on + strand, within MPMX20_04467 at 4671.596 kb on + strand, within MPMX20_04467 at 4671.611 kb on - strand, within MPMX20_04467 at 4671.653 kb on + strand, within MPMX20_04467 at 4671.740 kb on - strand, within MPMX20_04467 at 4671.776 kb on - strand, within MPMX20_04467 at 4671.776 kb on - strand, within MPMX20_04467 at 4671.841 kb on - strand, within MPMX20_04467 at 4671.866 kb on - strand, within MPMX20_04467 at 4671.891 kb on + strand, within MPMX20_04467 at 4672.073 kb on + strand at 4672.081 kb on - strand at 4672.081 kb on - strand at 4672.093 kb on + strand at 4672.101 kb on - strand at 4672.101 kb on - strand at 4672.141 kb on + strand at 4672.151 kb on + strand at 4672.151 kb on + strand at 4672.151 kb on + strand at 4672.173 kb on - strand at 4672.310 kb on + strand at 4672.318 kb on - strand at 4672.384 kb on + strand, within MPMX20_04468 at 4672.384 kb on + strand, within MPMX20_04468 at 4672.384 kb on + strand, within MPMX20_04468 at 4672.384 kb on + strand, within MPMX20_04468 at 4672.384 kb on + strand, within MPMX20_04468 at 4672.385 kb on - strand, within MPMX20_04468 at 4672.392 kb on - strand, within MPMX20_04468 at 4672.392 kb on - strand, within MPMX20_04468 at 4672.392 kb on - strand, within MPMX20_04468 at 4672.392 kb on - strand, within MPMX20_04468 at 4672.404 kb on - strand, within MPMX20_04468 at 4672.461 kb on + strand, within MPMX20_04468 at 4672.467 kb on + strand, within MPMX20_04468 at 4672.526 kb on + strand, within MPMX20_04468 at 4672.526 kb on + strand, within MPMX20_04468 at 4672.574 kb on + strand, within MPMX20_04468 at 4672.607 kb on + strand, within MPMX20_04468 at 4672.628 kb on + strand, within MPMX20_04468 at 4672.628 kb on + strand, within MPMX20_04468 at 4672.680 kb on + strand at 4672.692 kb on + strand at 4672.693 kb on - strand at 4672.747 kb on + strand at 4672.754 kb on - strand at 4672.944 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,670,169 - MPMX20_04465 0.69 -0.3 4,670,180 - MPMX20_04465 0.70 +2.0 4,670,197 + MPMX20_04465 0.72 -0.0 4,670,240 - MPMX20_04465 0.77 -1.8 4,670,371 + +0.4 4,670,385 - +0.4 4,670,404 - -0.4 4,670,404 - -0.9 4,670,404 - +1.0 4,670,481 + -1.8 4,670,493 - +0.5 4,670,518 - MPMX20_04466 0.10 -0.2 4,670,535 - MPMX20_04466 0.12 -0.1 4,670,561 + MPMX20_04466 0.16 -2.7 4,670,652 - MPMX20_04466 0.29 -1.0 4,670,662 + MPMX20_04466 0.30 +0.4 4,670,746 - MPMX20_04466 0.42 -1.0 4,670,757 - MPMX20_04466 0.44 -1.5 4,670,788 + MPMX20_04466 0.48 -1.9 4,670,852 + MPMX20_04466 0.57 -1.5 4,671,009 - MPMX20_04466 0.79 +0.4 4,671,194 + -0.4 4,671,194 + -0.0 4,671,194 + -4.6 4,671,194 + -2.2 4,671,194 + -1.4 4,671,202 - -1.0 4,671,202 - -1.8 4,671,211 + +0.4 4,671,219 - +1.0 4,671,280 + MPMX20_04467 0.16 -1.2 4,671,288 - MPMX20_04467 0.17 -0.0 4,671,288 - MPMX20_04467 0.17 -0.8 4,671,288 - MPMX20_04467 0.17 -1.7 4,671,462 - MPMX20_04467 0.38 -1.6 4,671,474 + MPMX20_04467 0.39 -1.5 4,671,503 + MPMX20_04467 0.43 -2.2 4,671,526 + MPMX20_04467 0.45 -1.1 4,671,534 - MPMX20_04467 0.46 -0.9 4,671,534 - MPMX20_04467 0.46 -0.9 4,671,595 + MPMX20_04467 0.54 +0.4 4,671,596 + MPMX20_04467 0.54 -0.8 4,671,611 - MPMX20_04467 0.56 +0.4 4,671,653 + MPMX20_04467 0.61 -0.4 4,671,740 - MPMX20_04467 0.71 -1.7 4,671,776 - MPMX20_04467 0.76 -0.4 4,671,776 - MPMX20_04467 0.76 -3.1 4,671,841 - MPMX20_04467 0.84 -2.0 4,671,866 - MPMX20_04467 0.87 -0.0 4,671,891 + MPMX20_04467 0.90 -0.0 4,672,073 + -0.8 4,672,081 - +0.6 4,672,081 - -0.3 4,672,093 + -0.0 4,672,101 - -0.8 4,672,101 - +0.6 4,672,141 + -1.1 4,672,151 + +0.8 4,672,151 + +0.3 4,672,151 + +0.2 4,672,173 - +0.2 4,672,310 + +0.4 4,672,318 - +0.4 4,672,384 + MPMX20_04468 0.11 -0.9 4,672,384 + MPMX20_04468 0.11 -0.8 4,672,384 + MPMX20_04468 0.11 +1.6 4,672,384 + MPMX20_04468 0.11 -1.3 4,672,384 + MPMX20_04468 0.11 +1.0 4,672,385 - MPMX20_04468 0.11 +0.4 4,672,392 - MPMX20_04468 0.13 -0.1 4,672,392 - MPMX20_04468 0.13 -1.5 4,672,392 - MPMX20_04468 0.13 -0.4 4,672,392 - MPMX20_04468 0.13 +0.3 4,672,404 - MPMX20_04468 0.17 -0.6 4,672,461 + MPMX20_04468 0.35 +1.0 4,672,467 + MPMX20_04468 0.36 -1.1 4,672,526 + MPMX20_04468 0.55 -0.6 4,672,526 + MPMX20_04468 0.55 -1.2 4,672,574 + MPMX20_04468 0.70 +1.0 4,672,607 + MPMX20_04468 0.80 -0.4 4,672,628 + MPMX20_04468 0.87 -0.5 4,672,628 + MPMX20_04468 0.87 +3.0 4,672,680 + +0.1 4,672,692 + +0.2 4,672,693 - +2.0 4,672,747 + -0.8 4,672,754 - -0.5 4,672,944 - -2.5
Or see this region's nucleotide sequence