Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04444

Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04442 and MPMX20_04443 are separated by 2 nucleotidesMPMX20_04443 and MPMX20_04444 are separated by 3 nucleotidesMPMX20_04444 and MPMX20_04445 are separated by 76 nucleotides MPMX20_04442: MPMX20_04442 - Sec-independent protein translocase protein TatC, at 4,645,245 to 4,646,015 _04442 MPMX20_04443: MPMX20_04443 - Sec-independent protein translocase protein TatB, at 4,646,018 to 4,646,560 _04443 MPMX20_04444: MPMX20_04444 - Sec-independent protein translocase protein TatA, at 4,646,564 to 4,646,818 _04444 MPMX20_04445: MPMX20_04445 - putative protein kinase UbiB, at 4,646,895 to 4,648,535 _04445 Position (kb) 4646 4647Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 4645.575 kb on + strand, within MPMX20_04442at 4645.617 kb on + strand, within MPMX20_04442at 4645.619 kb on - strand, within MPMX20_04442at 4645.644 kb on - strand, within MPMX20_04442at 4645.665 kb on - strand, within MPMX20_04442at 4645.737 kb on + strand, within MPMX20_04442at 4645.737 kb on + strand, within MPMX20_04442at 4645.849 kb on - strand, within MPMX20_04442at 4645.893 kb on - strand, within MPMX20_04442at 4645.970 kb on + strandat 4645.978 kb on - strandat 4646.215 kb on - strand, within MPMX20_04443at 4646.342 kb on - strand, within MPMX20_04443at 4646.401 kb on - strand, within MPMX20_04443at 4646.457 kb on - strand, within MPMX20_04443at 4646.457 kb on - strand, within MPMX20_04443at 4646.457 kb on - strand, within MPMX20_04443at 4646.514 kb on - strandat 4646.562 kb on + strandat 4646.562 kb on + strandat 4646.635 kb on - strand, within MPMX20_04444at 4646.661 kb on + strand, within MPMX20_04444at 4646.821 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,645,575 + MPMX20_04442 0.43 -1.7
4,645,617 + MPMX20_04442 0.48 -0.6
4,645,619 - MPMX20_04442 0.49 -3.0
4,645,644 - MPMX20_04442 0.52 -1.6
4,645,665 - MPMX20_04442 0.54 -1.2
4,645,737 + MPMX20_04442 0.64 +0.4
4,645,737 + MPMX20_04442 0.64 -0.8
4,645,849 - MPMX20_04442 0.78 -2.2
4,645,893 - MPMX20_04442 0.84 -1.7
4,645,970 + -0.0
4,645,978 - -2.0
4,646,215 - MPMX20_04443 0.36 -2.0
4,646,342 - MPMX20_04443 0.60 -3.1
4,646,401 - MPMX20_04443 0.71 -1.0
4,646,457 - MPMX20_04443 0.81 -2.1
4,646,457 - MPMX20_04443 0.81 +5.2
4,646,457 - MPMX20_04443 0.81 -0.6
4,646,514 - +2.0
4,646,562 + -1.2
4,646,562 + +1.2
4,646,635 - MPMX20_04444 0.28 -1.0
4,646,661 + MPMX20_04444 0.38 -2.4
4,646,821 - +1.0

Or see this region's nucleotide sequence